Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RPS7P13-201ENST00000413955 498 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC083875.1-201ENST00000419509 405 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC122718.1-201ENST00000439448 744 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AL662791.1-201ENST00000441992 928 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AL592447.1-201ENST00000447592 540 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RPL7P52-201ENST00000449200 742 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 HMGB1P15-201ENST00000453854 435 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 snoU109.4-201ENST00000458953 143 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 MEMO1P3-201ENST00000459811 302 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 FAM133DP-201ENST00000464802 691 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC078785.3-201ENST00000476607 425 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RN7SL691P-201ENST00000494487 301 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 COX7A2P2-201ENST00000505291 250 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 HMGB1P22-201ENST00000505315 124 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RNA5SP216-201ENST00000516111 123 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RNA5SP315-201ENST00000516340 116 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RNA5SP49-201ENST00000516450 115 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RNA5SP519-201ENST00000516480 119 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 RNA5SP312-201ENST00000517068 116 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC008638.3-201ENST00000603341 463 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 AC024941.1-201ENST00000612250 334 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LONRF3Q496Y0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.74□□□□□ -1.65
LONRF3Q496Y0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC097714.1-201ENST00000511272 1647 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AL672296.1-201ENST00000427780 2158 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RPL23AP57-201ENST00000332361 466 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MIR448-201ENST00000362131 111 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 Y_RNA.3-201ENST00000362331 103 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RNU6-28P-201ENST00000362378 107 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RNU1-14P-201ENST00000362759 152 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 SNORA57.1-201ENST00000391227 145 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MTCYBP36-201ENST00000404146 440 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC245052.5-201ENST00000416320 649 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MTND1P28-201ENST00000435623 950 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MTCYBP1-201ENST00000454315 1119 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RNU7-136P-201ENST00000458819 69 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RPS7P7-201ENST00000463499 571 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RPS29P19-201ENST00000479709 171 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC008958.1-201ENST00000511047 682 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC093853.1-201ENST00000515689 483 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 RN7SKP289-201ENST00000517244 295 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MTND1P5-201ENST00000517906 940 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC063950.1-201ENST00000552036 308 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MTND1P15-201ENST00000579262 949 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 MIR548AB-201ENST00000584917 84 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AC012669.1-201ENST00000603209 283 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AL139395.1-201ENST00000603662 160 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.73□□□□□ -1.65
LONRF3Q496Y0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.73□□□□□ -1.65
LONRF3Q496Y0 AL022578.1-201ENST00000439330 1433 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 MIR372-201ENST00000362225 67 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RNU6-50P-201ENST00000362356 103 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RNA5SP513-201ENST00000364648 118 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LONRF3Q496Y0 RNU1-13P-201ENST00000384499 162 ntBASIC4.72□□□□□ -1.65
LONRF3Q496Y0 AC025750.1-201ENST00000399891 379 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms