Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AL158042.1-201ENST00000605338 460 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC100793.4-201ENST00000613683 429 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC007490.1-201ENST00000624321 703 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 FAM157B-203ENST00000639350 358 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 AC005539.1-201ENST00000443768 1479 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
SIX1Q15475 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIX1Q15475 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIX1Q15475 SNORA70.4-201ENST00000365509 134 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 RNU6-657P-201ENST00000383904 107 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL049545.1-201ENST00000401856 572 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL450338.1-201ENST00000407987 512 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 RNU2-28P-201ENST00000410457 189 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 HMGN1P24-201ENST00000412282 298 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC007899.1-201ENST00000412776 775 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX1Q15475 RPS6P15-201ENST00000431996 751 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 MTCO1P48-201ENST00000448024 1096 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 SLC31A1P1-201ENST00000451221 567 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 MTCO3P2-201ENST00000457365 171 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX1Q15475 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 MTCYBP37-201ENST00000510642 1133 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 FTH1P9-201ENST00000513251 355 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 APOOP4-201ENST00000513530 597 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 AC104057.1-201ENST00000515547 497 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC105185.1-201ENST00000518705 535 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AP003461.1-201ENST00000528866 78 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 SLC2A13P1-201ENST00000531560 322 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 AC090502.2-201ENST00000549267 280 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.32□□□□□ -1.88
SIX1Q15475 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.32□□□□□ -1.88
SIX1Q15475 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 VN1R82P-201ENST00000601481 356 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL353778.1-201ENST00000603149 408 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL139344.1-201ENST00000605228 195 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AL592221.1-201ENST00000605266 382 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC092354.2-201ENST00000607786 514 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AP001521.1-201ENST00000609150 300 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC068722.2-201ENST00000618734 544 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 AC091304.6-201ENST00000619761 202 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX1Q15475 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.32□□□□□ -1.88
SIX1Q15475 AC090229.1-201ENST00000590983 1609 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIX1Q15475 AL049781.1-201ENST00000623195 3585 ntBASIC3.32□□□□□ -1.88
SIX1Q15475 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
SIX1Q15475 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX1Q15475 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX1Q15475 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SIX1Q15475 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 RNU6-1226P-201ENST00000384317 107 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 SNORA11.1-201ENST00000408133 129 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC069218.2-201ENST00000411665 344 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC004987.3-201ENST00000413879 771 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX1Q15475 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC008065.1-201ENST00000428525 348 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX1Q15475 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SIX1Q15475 MTND2P20-201ENST00000440805 661 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 RPL23AP16-201ENST00000441715 421 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX1Q15475 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX1Q15475 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC010301.1-201ENST00000473936 355 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.31□□□□□ -1.88
SIX1Q15475 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX1Q15475 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX1Q15475 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
SIX1Q15475 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX1Q15475 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX1Q15475 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms