Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AL135786.1-201ENST00000415892 214 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC005517.2-201ENST00000424673 553 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PTCH1Q13635 RNFT1P2-201ENST00000443064 757 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 MTND1P33-201ENST00000446251 917 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 NPM1P49-201ENST00000448027 714 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCH1Q13635 AC015724.1-201ENST00000478577 156 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 NCOR1P1-202ENST00000486162 291 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC016065.2-201ENST00000514530 444 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 RNU6-548P-201ENST00000517083 115 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 RPL7P20-201ENST00000520308 745 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 OR5D17P-201ENST00000531492 978 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCH1Q13635 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCH1Q13635 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCH1Q13635 AC096586.1-201ENST00000610267 561 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AL354696.1-201ENST00000614652 497 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 MIR4278-201ENST00000636094 69 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
PTCH1Q13635 PABPC1P7-201ENST00000413177 1513 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 CYCSP45-201ENST00000402289 315 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 EI24P1-201ENST00000416584 867 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCH1Q13635 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 EXTL2P1-201ENST00000446218 416 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 BX248409.1-201ENST00000455497 255 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCH1Q13635 AP001086.1-201ENST00000494882 321 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 HMGN2P28-201ENST00000606102 262 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 HPVC1-201ENST00000629899 1198 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC068620.4-201ENST00000636730 1182 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC132825.7-201ENST00000638744 335 ntBASIC3.7□□□□□ -1.82
PTCH1Q13635 AC066616.2-201ENST00000559334 1481 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PTCH1Q13635 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCH1Q13635 SNORD62.1-201ENST00000362541 86 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 OR51A3P-201ENST00000413596 924 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AL158825.1-201ENST00000414735 521 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 MTCYBP24-201ENST00000420387 1106 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AC244098.2-201ENST00000422068 99 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 VN1R42P-201ENST00000424651 344 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AL139415.2-201ENST00000431968 163 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.69□□□□□ -1.82
PTCH1Q13635 AC087879.1-201ENST00000474343 374 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AC068305.1-201ENST00000497406 726 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCH1Q13635 AC022069.1-201ENST00000582910 658 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 VN1R88P-201ENST00000596787 292 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AC048347.1-201ENST00000624621 427 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 HSPA8P4-201ENST00000511877 1920 ntBASIC3.69□□□□□ -1.82
PTCH1Q13635 AP000526.1-201ENST00000603308 1388 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTCH1Q13635 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
PTCH1Q13635 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.68□□□□□ -1.82
PTCH1Q13635 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.68□□□□□ -1.82
PTCH1Q13635 AC008264.2-201ENST00000610193 3731 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 RNU4-53P-201ENST00000410828 140 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 AL451074.5-201ENST00000415894 435 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 AC008173.1-201ENST00000418901 264 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCH1Q13635 ISCA1P6-201ENST00000427740 390 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 RPL36P19-201ENST00000430744 301 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 RPL7P12-201ENST00000446719 750 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.68□□□□□ -1.82
PTCH1Q13635 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCH1Q13635 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCH1Q13635 MTND2P30-201ENST00000456663 382 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 RPS27AP9-201ENST00000477681 438 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 OR5H5P-201ENST00000503164 928 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 SNORA70.14-201ENST00000516205 110 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCH1Q13635 AC104229.1-201ENST00000561364 255 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.68□□□□□ -1.82
PTCH1Q13635 ZNF92P2-201ENST00000600543 1059 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 AC005156.1-201ENST00000613371 573 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 AL118556.2-201ENST00000614375 824 ntBASIC3.68□□□□□ -1.82
PTCH1Q13635 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.68□□□□□ -1.82
PTCH1Q13635 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCH1Q13635 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCH1Q13635 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCH1Q13635 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 RPS3AP26-201ENST00000398259 784 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms