Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AC010655.1-201ENST00000449336 292 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 CECR9-201ENST00000453421 199 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 SETP20-201ENST00000457046 852 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC128713.1-201ENST00000471495 306 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 TRBV1-201ENST00000476502 284 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 PPIAP19-201ENST00000486414 492 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC004453.1-201ENST00000487895 408 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 RN7SL283P-201ENST00000489055 303 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH1Q08174 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH1Q08174 TBCAP3-201ENST00000512475 312 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 RNU6-1271P-201ENST00000517049 105 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC022360.1-201ENST00000521058 340 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 MIR3614-201ENST00000581261 86 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 MIR3941-201ENST00000582572 103 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AL670379.6-201ENST00000603753 252 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC008162.1-201ENST00000604718 254 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL670379.1-201ENST00000604752 252 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL354984.3-201ENST00000604803 325 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL670379.5-201ENST00000605253 252 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL670379.8-201ENST00000605353 252 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL670379.7-201ENST00000605823 252 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 U2.17-201ENST00000611454 95 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 IQCB2P-201ENST00000401788 1633 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH1Q08174 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDH1Q08174 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PCDH1Q08174 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PCDH1Q08174 RNU6-946P-201ENST00000383878 107 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 RNU6-1222P-201ENST00000384615 107 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 SNORD70.1-201ENST00000391007 85 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 RNU4-6P-201ENST00000410804 122 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH1Q08174 RPL21P24-201ENST00000413752 448 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 E2F6P2-201ENST00000420708 748 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH1Q08174 AL360081.1-201ENST00000428299 555 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH1Q08174 Z98949.2-201ENST00000440996 144 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC090804.1-201ENST00000448870 490 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH1Q08174 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH1Q08174 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 MRPS35P2-201ENST00000508242 191 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC011411.1-201ENST00000509592 876 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH1Q08174 Y_RNA.708-201ENST00000516950 96 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 RNU6-264P-201ENST00000517134 104 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 IGKV3D-34-201ENST00000522638 302 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AP001922.4-201ENST00000526967 290 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH1Q08174 DYNLL1P4-201ENST00000549314 266 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AL359219.2-201ENST00000555184 348 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 MIR5692C1-201ENST00000585309 91 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 AL138889.2-201ENST00000603883 242 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AL031320.1-201ENST00000604177 357 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC009229.3-201ENST00000608056 282 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AC009570.1-201ENST00000609599 745 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 AL118522.2-201ENST00000616045 615 ntBASIC5.28□□□□□ -1.56
PCDH1Q08174 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH1Q08174 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDH1Q08174 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDH1Q08174 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AL031595.2-201ENST00000624215 19071 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms