Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK3Q00526 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK3Q00526 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDK3Q00526 MAPK10-373ENST00000641983 6772 ntBASIC3.62□□□□□ -1.83
CDK3Q00526 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK3Q00526 AC106871.1-201ENST00000568324 3102 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 PNPT1P2-201ENST00000456768 2050 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK3Q00526 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK3Q00526 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 RNU5A-2P-201ENST00000384337 116 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL138880.1-201ENST00000405824 642 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC245054.1-201ENST00000420944 258 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 AL365203.2-201ENST00000423444 196 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL365396.1-201ENST00000430854 671 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 EZH2P1-201ENST00000431167 291 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MTND4LP10-201ENST00000435146 291 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 UBE2FP3-201ENST00000436366 524 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MTCYBP39-201ENST00000437562 491 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 LSM1P1-201ENST00000438629 273 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDK3Q00526 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 NPM1P49-201ENST00000448027 714 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL358232.1-201ENST00000448030 501 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MTCO1P27-201ENST00000448269 226 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC010655.1-201ENST00000449336 292 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 ST13P14-201ENST00000474095 734 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 HMGB1P36-201ENST00000487709 576 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC006499.5-201ENST00000505037 514 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC093809.1-201ENST00000509155 340 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC010342.1-201ENST00000514047 877 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC119751.5-201ENST00000514077 770 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MTND5P4-201ENST00000514978 288 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 RNU6-759P-201ENST00000516740 103 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK3Q00526 OSBPL9P5-201ENST00000542581 171 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 AL121603.1-201ENST00000553815 142 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC074050.1-201ENST00000563247 211 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC012435.1-202ENST00000568772 240 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC136618.2-201ENST00000575091 400 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC006270.2-201ENST00000578523 652 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 AC004853.1-201ENST00000604902 698 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC072039.2-201ENST00000608883 439 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AC004223.4-201ENST00000612426 332 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 AL596245.1-201ENST00000618994 362 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 CRYM-AS1-204ENST00000637983 556 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 OR11H5P-202ENST00000641612 1325 ntBASIC3.61□□□□□ -1.83
CDK3Q00526 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDK3Q00526 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK3Q00526 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CDK3Q00526 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK3Q00526 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK3Q00526 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK3Q00526 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CDK3Q00526 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 RNA5SP235-201ENST00000365411 114 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK3Q00526 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.6□□□□□ -1.83
CDK3Q00526 EI24P1-201ENST00000416584 867 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK3Q00526 HMGN2P31-201ENST00000432430 273 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK3Q00526 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK3Q00526 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK3Q00526 AL353691.1-201ENST00000451332 387 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 DNAJC19P1-201ENST00000455312 319 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK3Q00526 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK3Q00526 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK3Q00526 RPF2P2-201ENST00000504693 896 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 MTND1P22-201ENST00000510572 951 ntBASIC3.6□□□□□ -1.83
CDK3Q00526 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms