Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HSPG2P98160 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HSPG2P98160 SDCBPP3-201ENST00000419629 891 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.32□□□□□ -2.2
HSPG2P98160 POU5F1P7-201ENST00000508759 541 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC068339.2-201ENST00000534395 618 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC093536.2-201ENST00000565257 1406 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HSPG2P98160 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 RN7SKP226-201ENST00000364912 300 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 RNU1-57P-201ENST00000384491 166 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 CACYBPP1-201ENST00000438592 684 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 GOLGA5P1-201ENST00000507317 980 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 TMEM248P1-201ENST00000510579 951 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HSPG2P98160 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HSPG2P98160 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.31□□□□□ -2.2
HSPG2P98160 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 MTCO3P31-201ENST00000405526 789 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 RNA5SP129-201ENST00000410276 118 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 RPS29P12-201ENST00000460178 152 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 OR5D17P-201ENST00000531492 978 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.31□□□□□ -2.2
HSPG2P98160 MIR219B-201ENST00000637023 88 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HSPG2P98160 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HSPG2P98160 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 HMGB1P31-201ENST00000437242 427 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 RPL23AP63-201ENST00000498752 471 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 SUB1P3-201ENST00000564581 315 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC093775.1-201ENST00000624154 1868 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.31□□□□□ -2.2
HSPG2P98160 AC073136.2-201ENST00000417282 849 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 RPL36AP6-201ENST00000435770 321 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC009237.8-201ENST00000445492 379 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC004263.1-201ENST00000479327 332 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC034244.1-201ENST00000507687 207 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.31□□□□□ -2.2
HSPG2P98160 RPAP2P1-201ENST00000603626 1168 ntBASIC1.31□□□□□ -2.2
HSPG2P98160 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.31□□□□□ -2.2
HSPG2P98160 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HSPG2P98160 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HSPG2P98160 AC233981.2-201ENST00000611524 1614 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 Y_RNA.354-201ENST00000365448 111 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 RNA5SP210-201ENST00000391034 120 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 EI24P1-201ENST00000416584 867 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 SNORA70.14-201ENST00000516205 110 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.3□□□□□ -2.2
HSPG2P98160 Z99129.2-201ENST00000619967 314 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AL023807.1-201ENST00000407932 359 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AL513175.2-201ENST00000422071 443 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.3□□□□□ -2.2
HSPG2P98160 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.3□□□□□ -2.2
HSPG2P98160 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.3□□□□□ -2.2
HSPG2P98160 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.3□□□□□ -2.2
HSPG2P98160 AC131238.1-201ENST00000617135 328 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AC093010.3-201ENST00000570269 15214 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 NR1H5P-201ENST00000452683 1377 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 RPS7P5-201ENST00000441482 581 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 RN7SKP49-201ENST00000516675 260 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AMZ2P1-203ENST00000565833 850 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.3□□□□□ -2.2
HSPG2P98160 AP000787.2-201ENST00000604432 568 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
HSPG2P98160 PNPT1P2-201ENST00000456768 2050 ntBASIC1.3□□□□□ -2.2
HSPG2P98160 SNORD6-201ENST00000365444 73 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 MIR142-201ENST00000384835 87 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 AC003989.2-201ENST00000440224 169 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.29□□□□□ -2.2
HSPG2P98160 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.29□□□□□ -2.2
HSPG2P98160 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC093591.3-201ENST00000634516 308 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC093909.5-201ENST00000621839 1799 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
HSPG2P98160 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 AC104332.2-201ENST00000429959 156 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms