Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NKX6-1P78426 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX6-1P78426 SNORA73.1-201ENST00000363107 205 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 Y_RNA.409-201ENST00000383990 98 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NKX6-1P78426 MIR1277-201ENST00000408536 78 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RN7SKP100-201ENST00000411258 284 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 MTND4LP11-201ENST00000422184 280 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AL359265.2-201ENST00000434367 631 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX6-1P78426 CYCSP34-201ENST00000458172 304 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RPS7P7-201ENST00000463499 571 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RPL31P58-201ENST00000469001 379 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RPS15AP36-201ENST00000492022 382 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 ARL4AP2-201ENST00000507378 601 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 RN7SKP276-201ENST00000516242 268 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RNA5SP360-201ENST00000516555 118 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 RNA5SP392-201ENST00000516905 112 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AP004371.1-201ENST00000525240 214 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 DEFB109D-201ENST00000529497 240 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AL512360.1-201ENST00000555346 234 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC012182.1-201ENST00000570133 895 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 MIR4277-201ENST00000578298 84 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC098848.2-201ENST00000588023 330 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.25□□□□□ -1.73
NKX6-1P78426 Z84480.1-201ENST00000605131 311 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 SNORD91B-202ENST00000608459 222 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 CR381572.2-201ENST00000624852 397 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 MIR3688-2-201ENST00000636963 87 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 AC004925.1-201ENST00000624256 2706 ntBASIC4.25□□□□□ -1.73
NKX6-1P78426 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NKX6-1P78426 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX6-1P78426 OR51H2P-202ENST00000641424 3046 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NKX6-1P78426 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX6-1P78426 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX6-1P78426 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX6-1P78426 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX6-1P78426 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC00622-201ENST00000562811 1570 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX6-1P78426 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX6-1P78426 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX6-1P78426 RNU6-1120P-201ENST00000362988 108 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RNU5E-8P-201ENST00000363502 116 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RNY4P14-201ENST00000363656 96 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RNU6-1074P-201ENST00000383995 104 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NKX6-1P78426 RNA5SP107-201ENST00000411358 122 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX6-1P78426 UBE2FP1-201ENST00000416536 447 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RGS17P1-201ENST00000423358 553 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RWDD4P2-201ENST00000426392 563 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RSL24D1P6-201ENST00000426934 401 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX6-1P78426 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX6-1P78426 AC000111.3-201ENST00000433478 193 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AC004866.2-201ENST00000438285 481 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 HMGB3P12-201ENST00000438745 556 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AL662791.1-201ENST00000441992 928 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX6-1P78426 AL162388.1-201ENST00000450912 352 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX6-1P78426 AC092989.1-201ENST00000481235 277 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.24□□□□□ -1.73
NKX6-1P78426 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.24□□□□□ -1.73
NKX6-1P78426 ENPP7P9-201ENST00000514456 627 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 Y_RNA.693-201ENST00000516641 110 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 RNU6-64P-201ENST00000517119 105 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX6-1P78426 AC090572.1-201ENST00000519251 160 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AC134698.5-201ENST00000519444 336 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX6-1P78426 OR4R1P-201ENST00000529879 463 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AP001880.2-201ENST00000538233 448 ntBASIC4.24□□□□□ -1.73
NKX6-1P78426 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms