Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CX3CL1P78423 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CX3CL1P78423 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CX3CL1P78423 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 MTCO1P9-201ENST00000505577 1534 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 XIAPP3-201ENST00000312918 795 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 SNORA31-201ENST00000362607 130 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RNA5SP189-201ENST00000364920 115 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RNU6-1181P-201ENST00000384191 106 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CX3CL1P78423 RNU6-882P-201ENST00000391025 103 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 OR6C69P-201ENST00000394268 893 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RPL7P25-201ENST00000404151 721 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 SNORA3C-201ENST00000408792 125 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC016397.1-201ENST00000412463 242 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 CCDC58P2-201ENST00000417131 366 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RPL23AP38-201ENST00000423801 469 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 COX6B1P7-201ENST00000430845 235 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC010153.1-201ENST00000432862 727 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 BTF3P10-201ENST00000433415 495 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AL138799.3-201ENST00000438968 350 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AL359073.1-201ENST00000448036 403 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 USP9YP12-201ENST00000450481 570 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC098824.1-201ENST00000453565 980 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RAD23BP3-201ENST00000454157 1152 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC109327.1-201ENST00000471666 403 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 RPL31P13-201ENST00000484151 370 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC105137.1-201ENST00000484355 562 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 RPL7P23-201ENST00000493874 747 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC106872.2-201ENST00000494303 480 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC112204.1-201ENST00000502591 103 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC099522.1-202ENST00000514718 367 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CL1P78423 SETP2-201ENST00000553886 926 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC007424.1-203ENST00000554613 687 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC012182.1-201ENST00000570133 895 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 SNORD84-203ENST00000584275 78 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 MIR3138-201ENST00000585238 82 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AP001429.1-201ENST00000602568 530 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 ARF4P1-201ENST00000605447 541 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AL158211.4-201ENST00000606988 584 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 AC064801.1-201ENST00000612025 407 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CL1P78423 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CX3CL1P78423 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 AP001486.2-201ENST00000561652 5113 ntBASIC3.31□□□□□ -1.88
CX3CL1P78423 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CX3CL1P78423 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CL1P78423 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CL1P78423 LARP1BP1-201ENST00000506036 1359 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 RNU4-91P-201ENST00000364778 135 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 Y_RNA.553-201ENST00000384670 102 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AL138878.1-201ENST00000405131 347 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC078974.1-201ENST00000411597 223 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 BTF3L4P1-201ENST00000413813 468 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms