Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 MIR4458-201ENST00000578872 75 ntBASIC1.29□□□□□ -2.2
RPL39P62891 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPL39P62891 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 AC079089.3-201ENST00000603094 673 ntBASIC1.29□□□□□ -2.2
RPL39P62891 AC007998.5-201ENST00000622938 237 ntBASIC1.29□□□□□ -2.2
RPL39P62891 OR1S1-201ENST00000624470 978 ntBASIC1.29□□□□□ -2.2
RPL39P62891 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 MTND4P34-201ENST00000572715 1371 ntBASIC1.29□□□□□ -2.2
RPL39P62891 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 XKRY2-202ENST00000623874 1581 ntBASIC1.29□□□□□ -2.2
RPL39P62891 XKRY-202ENST00000624960 1581 ntBASIC1.29□□□□□ -2.2
RPL39P62891 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPL39P62891 HMGB1P10-201ENST00000395823 563 ntBASIC1.28□□□□□ -2.2
RPL39P62891 MIR1289-1-201ENST00000408836 144 ntBASIC1.28□□□□□ -2.2
RPL39P62891 RNU2-2P-201ENST00000410396 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 RNU2-25P-201ENST00000411041 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.28□□□□□ -2.2
RPL39P62891 UBE2FP3-201ENST00000436366 524 ntBASIC1.28□□□□□ -2.2
RPL39P62891 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.28□□□□□ -2.2
RPL39P62891 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RPL39P62891 MTND4LP12-201ENST00000448237 295 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.28□□□□□ -2.2
RPL39P62891 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.28□□□□□ -2.2
RPL39P62891 RBM43P1-201ENST00000476891 1081 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC037198.2-201ENST00000478845 733 ntBASIC1.28□□□□□ -2.2
RPL39P62891 NAMPTP2-201ENST00000505629 1115 ntBASIC1.28□□□□□ -2.2
RPL39P62891 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.28□□□□□ -2.2
RPL39P62891 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.28□□□□□ -2.2
RPL39P62891 SYF2P1-201ENST00000550658 413 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC090897.2-201ENST00000581715 130 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC017100.2-201ENST00000584628 355 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.28□□□□□ -2.2
RPL39P62891 AP004372.1-201ENST00000604842 844 ntBASIC1.28□□□□□ -2.2
RPL39P62891 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.28□□□□□ -2.2
RPL39P62891 AC239803.2-201ENST00000610161 430 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.15-201ENST00000611544 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.16-201ENST00000613119 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.12-201ENST00000613778 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.20-201ENST00000613956 192 ntBASIC1.28□□□□□ -2.2
RPL39P62891 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RPL39P62891 U2.9-201ENST00000615427 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.11-201ENST00000616345 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.2-201ENST00000616535 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.3-201ENST00000617785 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.19-201ENST00000618602 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 RNU2-1-201ENST00000618664 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.6-201ENST00000619225 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.5-201ENST00000619465 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 AC092650.2-201ENST00000619984 902 ntBASIC1.28□□□□□ -2.2
RPL39P62891 U2.10-201ENST00000620268 191 ntBASIC1.28□□□□□ -2.2
RPL39P62891 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.28□□□□□ -2.2
RPL39P62891 AC245100.2-201ENST00000454544 1679 ntBASIC1.28□□□□□ -2.2
RPL39P62891 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.28□□□□□ -2.2
RPL39P62891 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
RPL39P62891 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPL39P62891 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.28□□□□□ -2.21
RPL39P62891 AL359851.1-201ENST00000569460 4997 ntBASIC1.28□□□□□ -2.21
RPL39P62891 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RPL39P62891 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
RPL39P62891 RNA5SP363-201ENST00000365072 115 ntBASIC1.27□□□□□ -2.21
RPL39P62891 AC234782.4-201ENST00000417646 1048 ntBASIC1.27□□□□□ -2.21
RPL39P62891 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC1.27□□□□□ -2.21
RPL39P62891 AL445646.1-201ENST00000431784 216 ntBASIC1.27□□□□□ -2.21
RPL39P62891 AC007182.2-201ENST00000489251 402 ntBASIC1.27□□□□□ -2.21
RPL39P62891 SNORD59.2-201ENST00000516873 68 ntBASIC1.27□□□□□ -2.21
RPL39P62891 RN7SKP283-201ENST00000517197 270 ntBASIC1.27□□□□□ -2.21
RPL39P62891 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.27□□□□□ -2.21
RPL39P62891 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.27□□□□□ -2.21
RPL39P62891 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.27□□□□□ -2.21
RPL39P62891 MIR3618-201ENST00000580330 88 ntBASIC1.27□□□□□ -2.21
RPL39P62891 AC068790.3-201ENST00000602988 553 ntBASIC1.27□□□□□ -2.21
RPL39P62891 RPP40P2-201ENST00000603596 712 ntBASIC1.27□□□□□ -2.21
RPL39P62891 AL589935.2-201ENST00000616471 1231 ntBASIC1.27□□□□□ -2.21
RPL39P62891 MIR219B-201ENST00000637023 88 ntBASIC1.27□□□□□ -2.21
RPL39P62891 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
RPL39P62891 AL354685.2-201ENST00000448218 1447 ntBASIC1.26□□□□□ -2.21
RPL39P62891 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RPL39P62891 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPL39P62891 SNORD48-201ENST00000364953 64 ntBASIC1.26□□□□□ -2.21
RPL39P62891 SNORA6-201ENST00000384033 151 ntBASIC1.26□□□□□ -2.21
RPL39P62891 RNU6-1320P-201ENST00000390838 107 ntBASIC1.26□□□□□ -2.21
RPL39P62891 RNU6-1269P-201ENST00000391139 107 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AL079342.1-201ENST00000401460 267 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AL590290.1-201ENST00000405336 380 ntBASIC1.26□□□□□ -2.21
RPL39P62891 VN1R51P-201ENST00000411675 945 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL39P62891 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL39P62891 AL136380.1-201ENST00000447970 162 ntBASIC1.26□□□□□ -2.21
RPL39P62891 MTND6P32-201ENST00000457611 483 ntBASIC1.26□□□□□ -2.21
RPL39P62891 RNU6-599P-201ENST00000459383 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms