Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL133215.3-201ENST00000609801 448 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC068870.2-201ENST00000620635 389 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 AC121333.1-201ENST00000567488 2709 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
GFRA1P56159 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GFRA1P56159 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA1P56159 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC093849.1-201ENST00000563631 2209 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GFRA1P56159 SNORA58B-201ENST00000364259 136 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 RNU6-701P-201ENST00000384059 107 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 RNU6-692P-201ENST00000384496 107 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AC110754.1-201ENST00000399740 601 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 NDUFS5P1-201ENST00000405668 289 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.68□□□□□ -1.66
GFRA1P56159 RPL19P16-201ENST00000433839 588 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.68□□□□□ -1.66
GFRA1P56159 GAPDHP58-201ENST00000438477 1006 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 GAPDHP27-201ENST00000447427 1020 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AC073850.1-201ENST00000449243 255 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 SNORD19B-201ENST00000459623 84 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 MTND4P17-201ENST00000470444 350 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA1P56159 AP001804.3-201ENST00000525146 880 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AP003072.1-201ENST00000531740 145 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC092490.3-201ENST00000545370 572 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 BNIP3P25-201ENST00000596023 559 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 CTHRC1P1-201ENST00000605383 469 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC118658.2-201ENST00000618697 459 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.68□□□□□ -1.66
GFRA1P56159 MIR6839-201ENST00000620425 113 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 AP002799.1-201ENST00000623552 423 ntBASIC4.68□□□□□ -1.66
GFRA1P56159 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA1P56159 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA1P56159 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA1P56159 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 GVINP1-202ENST00000531871 7271 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.67□□□□□ -1.66
GFRA1P56159 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 AC022893.2-201ENST00000564832 3296 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.67□□□□□ -1.66
GFRA1P56159 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA1P56159 SNURFL-201ENST00000309296 343 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 Y_RNA.162-201ENST00000363683 102 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 SNORD113-7-201ENST00000363762 77 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 RPS23P10-201ENST00000416185 486 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 SSXP9-201ENST00000417503 292 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA1P56159 DDX39BP1-205ENST00000422507 192 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.67□□□□□ -1.66
GFRA1P56159 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA1P56159 RPL21P112-201ENST00000434403 463 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 CEACAMP7-201ENST00000444105 496 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 KNOP1P3-201ENST00000446933 426 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.67□□□□□ -1.66
GFRA1P56159 RNU7-66P-201ENST00000459469 62 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 VN1R105P-201ENST00000486595 910 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms