Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SRGNP1-201ENST00000603392 451 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC128687.1-201ENST00000605304 619 ntBASIC3.05□□□□□ -1.92
LIM2P55344 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.05□□□□□ -1.92
LIM2P55344 AC006023.2-201ENST00000609916 167 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC012531.5-201ENST00000611375 151 ntBASIC3.05□□□□□ -1.92
LIM2P55344 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LIM2P55344 AC092184.1-201ENST00000625042 715 ntBASIC3.05□□□□□ -1.92
LIM2P55344 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LIM2P55344 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIM2P55344 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIM2P55344 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LIM2P55344 AP001350.1-201ENST00000601906 1524 ntBASIC3.04□□□□□ -1.92
LIM2P55344 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 AC004925.1-201ENST00000624256 2706 ntBASIC3.04□□□□□ -1.92
LIM2P55344 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.04□□□□□ -1.92
LIM2P55344 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIM2P55344 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIM2P55344 RNA5SP258-201ENST00000362750 119 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RNU6-621P-201ENST00000364752 109 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 U3.19-201ENST00000390893 196 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC016769.3-201ENST00000396562 315 ntBASIC3.04□□□□□ -1.92
LIM2P55344 HMGB1P17-201ENST00000403495 628 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RNA5SP44-201ENST00000410446 133 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AL161449.1-201ENST00000414531 1199 ntBASIC3.04□□□□□ -1.92
LIM2P55344 MTCO3P12-201ENST00000416718 547 ntBASIC3.04□□□□□ -1.92
LIM2P55344 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.04□□□□□ -1.92
LIM2P55344 NANOGP5-201ENST00000424456 877 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AL451062.2-201ENST00000427515 271 ntBASIC3.04□□□□□ -1.92
LIM2P55344 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 EZH2P1-201ENST00000431167 291 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 AL591503.2-201ENST00000442314 1005 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
LIM2P55344 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.04□□□□□ -1.92
LIM2P55344 HMGN2P7-201ENST00000456186 273 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.04□□□□□ -1.92
LIM2P55344 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RPL21P104-201ENST00000464143 478 ntBASIC3.04□□□□□ -1.92
LIM2P55344 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LIM2P55344 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 HMGB1P22-201ENST00000505315 124 ntBASIC3.04□□□□□ -1.92
LIM2P55344 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.04□□□□□ -1.92
LIM2P55344 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
LIM2P55344 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 AC090695.1-201ENST00000561269 1222 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.04□□□□□ -1.92
LIM2P55344 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 AL606834.2-201ENST00000602954 668 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC010738.1-201ENST00000604970 987 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC124312.4-201ENST00000605533 310 ntBASIC3.04□□□□□ -1.92
LIM2P55344 RNU4-5P-201ENST00000607255 135 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AL158163.2-201ENST00000619110 700 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC109809.1-201ENST00000619665 545 ntBASIC3.04□□□□□ -1.92
LIM2P55344 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
LIM2P55344 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 AC090897.3-201ENST00000636973 1157 ntBASIC3.04□□□□□ -1.92
LIM2P55344 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.04□□□□□ -1.92
LIM2P55344 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.04□□□□□ -1.92
LIM2P55344 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LIM2P55344 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
LIM2P55344 EXOC5P1-201ENST00000510543 1969 ntBASIC3.03□□□□□ -1.92
LIM2P55344 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIM2P55344 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LIM2P55344 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LIM2P55344 SNRPEP3-201ENST00000338402 276 ntBASIC3.03□□□□□ -1.92
LIM2P55344 MIR148B-201ENST00000362252 99 ntBASIC3.03□□□□□ -1.92
LIM2P55344 U3.11-201ENST00000364476 212 ntBASIC3.03□□□□□ -1.92
LIM2P55344 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LIM2P55344 SNORD51-201ENST00000384320 80 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AL450338.1-201ENST00000407987 512 ntBASIC3.03□□□□□ -1.92
LIM2P55344 RNU2-42P-201ENST00000410697 113 ntBASIC3.03□□□□□ -1.92
LIM2P55344 RNU4-22P-201ENST00000411058 166 ntBASIC3.03□□□□□ -1.92
LIM2P55344 HMGB3P23-201ENST00000414981 585 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.03□□□□□ -1.92
LIM2P55344 AL049610.1-201ENST00000423374 372 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC092648.1-201ENST00000425870 423 ntBASIC3.03□□□□□ -1.92
LIM2P55344 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.03□□□□□ -1.92
LIM2P55344 AC084290.1-201ENST00000434995 374 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC091862.1-201ENST00000438016 1100 ntBASIC3.03□□□□□ -1.92
LIM2P55344 MTND4P6-201ENST00000438297 472 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC092427.1-201ENST00000439177 601 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.03□□□□□ -1.92
LIM2P55344 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.03□□□□□ -1.92
LIM2P55344 PTGES3P5-201ENST00000455109 434 ntBASIC3.03□□□□□ -1.92
LIM2P55344 SUMO2P2-201ENST00000456482 255 ntBASIC3.03□□□□□ -1.92
LIM2P55344 CEACAMP4-201ENST00000457676 421 ntBASIC3.03□□□□□ -1.92
LIM2P55344 AC026410.2-201ENST00000460281 156 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms