Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BNIP3P11-201ENST00000603878 563 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AL442067.2-201ENST00000614033 363 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AC040168.1-201ENST00000623594 991 ntBASIC3.07□□□□□ -1.92
CDH6P55285 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH6P55285 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 AL049780.3-201ENST00000624612 1583 ntBASIC3.07□□□□□ -1.92
CDH6P55285 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH6P55285 ZNF807-201ENST00000328088 1707 ntBASIC3.06□□□□□ -1.92
CDH6P55285 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
CDH6P55285 RNU6-549P-201ENST00000384433 107 ntBASIC3.06□□□□□ -1.92
CDH6P55285 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.06□□□□□ -1.92
CDH6P55285 U3.42-201ENST00000408746 214 ntBASIC3.06□□□□□ -1.92
CDH6P55285 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH6P55285 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH6P55285 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH6P55285 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH6P55285 DBF4P1-201ENST00000412976 1892 ntBASIC3.06□□□□□ -1.92
CDH6P55285 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH6P55285 AC233728.2-201ENST00000425348 757 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL353743.1-202ENST00000431724 1695 ntBASIC3.06□□□□□ -1.92
CDH6P55285 SNRPEP4-201ENST00000435815 279 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL590762.3-201ENST00000436372 640 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH6P55285 AL162389.1-201ENST00000449233 177 ntBASIC3.06□□□□□ -1.92
CDH6P55285 RPL36AP33-201ENST00000450395 310 ntBASIC3.06□□□□□ -1.92
CDH6P55285 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH6P55285 RPL27AP5-201ENST00000469428 449 ntBASIC3.06□□□□□ -1.92
CDH6P55285 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH6P55285 GAPDHP39-201ENST00000481866 979 ntBASIC3.06□□□□□ -1.92
CDH6P55285 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.06□□□□□ -1.92
CDH6P55285 NUP58P1-201ENST00000502546 1738 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC093767.1-201ENST00000504523 156 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC027338.1-201ENST00000514840 825 ntBASIC3.06□□□□□ -1.92
CDH6P55285 SNORA31.8-201ENST00000516327 108 ntBASIC3.06□□□□□ -1.92
CDH6P55285 RNA5SP135-201ENST00000517019 125 ntBASIC3.06□□□□□ -1.92
CDH6P55285 RN7SKP57-201ENST00000517248 293 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH6P55285 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH6P55285 OR5G4P-201ENST00000525251 760 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC018630.1-201ENST00000541376 925 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL391156.1-201ENST00000554965 554 ntBASIC3.06□□□□□ -1.92
CDH6P55285 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC010653.1-201ENST00000571108 881 ntBASIC3.06□□□□□ -1.92
CDH6P55285 MIR4789-201ENST00000577469 82 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL136520.1-201ENST00000600311 1322 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH6P55285 AC015871.2-201ENST00000603605 948 ntBASIC3.06□□□□□ -1.92
CDH6P55285 AC002487.1-201ENST00000604565 994 ntBASIC3.06□□□□□ -1.92
CDH6P55285 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH6P55285 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH6P55285 AL121594.5-201ENST00000631724 573 ntBASIC3.06□□□□□ -1.92
CDH6P55285 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH6P55285 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDH6P55285 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDH6P55285 RNU6-353P-201ENST00000364266 108 ntBASIC3.05□□□□□ -1.92
CDH6P55285 SNORD116-23-201ENST00000384645 92 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH6P55285 AC006946.1-201ENST00000429106 328 ntBASIC3.05□□□□□ -1.92
CDH6P55285 RPL31P54-201ENST00000429803 370 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH6P55285 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
CDH6P55285 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH6P55285 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH6P55285 AP001992.1-205ENST00000462248 379 ntBASIC3.05□□□□□ -1.92
CDH6P55285 RPL32P14-201ENST00000463196 378 ntBASIC3.05□□□□□ -1.92
CDH6P55285 RN7SL283P-201ENST00000489055 303 ntBASIC3.05□□□□□ -1.92
CDH6P55285 MLLT10P2-201ENST00000506434 249 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH6P55285 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH6P55285 SNRPGP16-201ENST00000533275 226 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH6P55285 AC107016.2-201ENST00000547968 190 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH6P55285 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH6P55285 MAGOH2P-202ENST00000584384 429 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH6P55285 AC073387.2-201ENST00000604797 784 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AC055876.5-201ENST00000605667 259 ntBASIC3.05□□□□□ -1.92
CDH6P55285 AC026741.1-201ENST00000605892 482 ntBASIC3.05□□□□□ -1.92
CDH6P55285 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
CDH6P55285 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH6P55285 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
CDH6P55285 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH6P55285 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH6P55285 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH6P55285 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH6P55285 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDH6P55285 OR5H2-201ENST00000355273 945 ntBASIC3.04□□□□□ -1.92
CDH6P55285 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDH6P55285 RNU6-251P-201ENST00000363235 104 ntBASIC3.04□□□□□ -1.92
CDH6P55285 SNORA70.4-201ENST00000365509 134 ntBASIC3.04□□□□□ -1.92
CDH6P55285 RNU6-1074P-201ENST00000383995 104 ntBASIC3.04□□□□□ -1.92
CDH6P55285 RPS3AP26-201ENST00000398259 784 ntBASIC3.04□□□□□ -1.92
CDH6P55285 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL024474.1-201ENST00000404655 591 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL138885.1-201ENST00000405921 675 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms