Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AP000542.1-201ENST00000448473 371 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC010655.1-201ENST00000449336 292 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 RPL23AP24-201ENST00000458203 385 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 MTND4LP3-201ENST00000468320 276 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC109486.1-201ENST00000486833 374 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC082651.2-201ENST00000496833 166 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AL139099.1-201ENST00000497398 403 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 OR2A20P-203ENST00000498397 1268 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
NR1H2P55055 BTF3L4P4-201ENST00000506381 449 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 SLC25A15P5-201ENST00000508033 253 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.99□□□□□ -1.77
NR1H2P55055 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.99□□□□□ -1.77
NR1H2P55055 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.99□□□□□ -1.77
NR1H2P55055 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NR1H2P55055 AP000827.1-201ENST00000527814 258 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 HIGD1AP10-201ENST00000527837 282 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 RFPL1S-203ENST00000539579 330 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.99□□□□□ -1.77
NR1H2P55055 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.99□□□□□ -1.77
NR1H2P55055 AC022916.3-201ENST00000592961 742 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AP001981.2-201ENST00000603241 418 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AL034351.1-201ENST00000605288 668 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC092354.1-201ENST00000606057 376 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AL031775.1-201ENST00000607014 887 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.99□□□□□ -1.77
NR1H2P55055 AC012409.3-201ENST00000611343 981 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC012531.5-201ENST00000611375 151 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC064801.1-201ENST00000612025 407 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 MIR6716-201ENST00000613413 80 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC009268.2-201ENST00000621925 457 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 AC068137.4-201ENST00000638485 296 ntBASIC3.99□□□□□ -1.77
NR1H2P55055 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H2P55055 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H2P55055 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H2P55055 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H2P55055 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H2P55055 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
NR1H2P55055 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 MAPK10-372ENST00000641954 3413 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.98□□□□□ -1.77
NR1H2P55055 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NR1H2P55055 RNU6-853P-201ENST00000364306 107 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 RNU6-1078P-201ENST00000364522 103 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 Y_RNA.318-201ENST00000365131 97 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 MIR135A2-201ENST00000384854 100 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AL136372.1-201ENST00000403060 228 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 Z97055.1-201ENST00000419730 712 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AL512649.1-201ENST00000428997 581 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AC012671.1-201ENST00000451912 203 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC098824.1-201ENST00000453565 980 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 HMGN2P7-201ENST00000456186 273 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 RN7SL93P-201ENST00000463035 293 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC091564.1-201ENST00000464563 479 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 RPL21P126-201ENST00000470049 478 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H2P55055 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AC068724.1-201ENST00000487100 792 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 RN7SL810P-201ENST00000493031 276 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC006499.5-201ENST00000505037 514 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC105914.1-201ENST00000511798 226 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.98□□□□□ -1.77
NR1H2P55055 MTCO1P35-201ENST00000515270 228 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 SNORA31.9-201ENST00000516429 84 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H2P55055 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.98□□□□□ -1.77
NR1H2P55055 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NR1H2P55055 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.98□□□□□ -1.77
NR1H2P55055 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 PCMTD1P2-201ENST00000565017 355 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H2P55055 MTCYBP33-201ENST00000575007 1130 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.98□□□□□ -1.77
NR1H2P55055 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 U73023.1-201ENST00000603134 700 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC067959.1-201ENST00000604334 379 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC012443.1-201ENST00000605605 231 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AC103710.4-201ENST00000609301 899 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 AL158063.1-201ENST00000615349 536 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NR1H2P55055 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.98□□□□□ -1.77
NR1H2P55055 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.98□□□□□ -1.77
NR1H2P55055 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms