Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 Y_RNA.555-201ENST00000384673 110 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 SSXP10-201ENST00000402595 565 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RN7SKP158-201ENST00000410453 326 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA2P52926 DPH3P2-201ENST00000422618 250 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC139712.2-201ENST00000424302 339 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA2P52926 RPL23AP30-201ENST00000432419 501 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 SKP1P1-201ENST00000438081 489 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 SLC31A1P1-201ENST00000451221 567 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 TRGVB-201ENST00000453257 471 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 PSMC1P13-201ENST00000458195 985 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC110749.1-201ENST00000462007 357 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RPL7P22-201ENST00000466005 733 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA2P52926 SNORA25.10-201ENST00000515926 124 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RNU6-138P-201ENST00000515952 107 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RNU6-976P-201ENST00000516086 111 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RNU6-885P-201ENST00000516607 104 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 Vault.3-201ENST00000516676 95 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RNU6-1261P-201ENST00000517194 104 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RPL7P20-201ENST00000520308 745 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 SUMO2P20-201ENST00000520803 283 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA2P52926 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGA2P52926 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA2P52926 AC024224.1-201ENST00000538284 609 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC092490.3-201ENST00000545370 572 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGA2P52926 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA2P52926 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA2P52926 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA2P52926 AF038458.1-201ENST00000588406 262 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGA2P52926 BNIP3P16-201ENST00000589779 534 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AC020910.3-201ENST00000603701 874 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 AL022345.1-201ENST00000607292 135 ntBASIC4.3□□□□□ -1.72
HMGA2P52926 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGA2P52926 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
HMGA2P52926 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGA2P52926 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGA2P52926 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGA2P52926 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HMGA2P52926 Y_RNA.60-201ENST00000362831 98 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 Y_RNA.255-201ENST00000364581 97 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RNU6-99P-201ENST00000364721 107 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RNU6-169P-201ENST00000365336 107 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 MIR525-201ENST00000384978 85 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMGA2P52926 U3.30-201ENST00000391308 210 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 RPL23AP32-201ENST00000395315 459 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA2P52926 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA2P52926 AC092745.2-202ENST00000411880 369 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC127526.1-201ENST00000417526 366 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 CYCSP10-201ENST00000417973 294 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL358176.3-201ENST00000420757 454 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RPL7L1P10-201ENST00000427790 463 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA2P52926 RBMY2QP-201ENST00000429799 1147 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 MTND5P15-201ENST00000434246 349 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA2P52926 AC092809.1-201ENST00000441469 474 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL359672.1-201ENST00000442302 409 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 MTCO3P45-201ENST00000443036 613 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL590664.1-201ENST00000448065 339 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA2P52926 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA2P52926 AC007967.1-201ENST00000455422 1159 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGA2P52926 RPS5P7-201ENST00000456664 608 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RN7SL172P-201ENST00000460535 303 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RPL5P30-201ENST00000465511 891 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC090142.1-201ENST00000465776 462 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC008571.1-201ENST00000467232 300 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGA2P52926 BX284632.1-201ENST00000478218 541 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC012158.1-204ENST00000483430 465 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC140172.1-201ENST00000502928 141 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGA2P52926 MTCO3P44-201ENST00000510977 541 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC018797.3-201ENST00000513388 1241 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RNU6-864P-201ENST00000516256 108 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 RNU6-1003P-201ENST00000517099 105 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 AC068587.4-201ENST00000533893 186 ntBASIC4.29□□□□□ -1.72
HMGA2P52926 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms