Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 Y_RNA.164-201ENST00000363709 102 ntBASIC3.51□□□□□ -1.85
MSH6P52701 Y_RNA.338-201ENST00000365320 114 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 ELOCP11-201ENST00000436690 332 ntBASIC3.51□□□□□ -1.85
MSH6P52701 RPL7P29-201ENST00000437151 728 ntBASIC3.51□□□□□ -1.85
MSH6P52701 ELOCP16-201ENST00000444494 332 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 RPL23AP70-201ENST00000483361 460 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AP001086.1-201ENST00000494882 321 ntBASIC3.51□□□□□ -1.85
MSH6P52701 RPL30P11-201ENST00000495304 339 ntBASIC3.51□□□□□ -1.85
MSH6P52701 DYNLL1P6-201ENST00000503440 264 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH6P52701 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH6P52701 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH6P52701 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 AC079610.2-201ENST00000604818 690 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH6P52701 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MSH6P52701 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.5□□□□□ -1.85
MSH6P52701 AC002543.1-201ENST00000299783 1954 ntBASIC3.5□□□□□ -1.85
MSH6P52701 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.5□□□□□ -1.85
MSH6P52701 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MSH6P52701 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MSH6P52701 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC023128.2-201ENST00000420880 1223 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC244505.4-201ENST00000434905 287 ntBASIC3.5□□□□□ -1.85
MSH6P52701 SSXP5-201ENST00000443473 287 ntBASIC3.5□□□□□ -1.85
MSH6P52701 GAPDHP27-201ENST00000447427 1020 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC092685.1-201ENST00000447960 1243 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH6P52701 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.5□□□□□ -1.85
MSH6P52701 AC108729.2-201ENST00000476543 840 ntBASIC3.5□□□□□ -1.85
MSH6P52701 TRAV31-201ENST00000502780 342 ntBASIC3.5□□□□□ -1.85
MSH6P52701 RNA5SP76-201ENST00000516277 87 ntBASIC3.5□□□□□ -1.85
MSH6P52701 SNORA9.3-201ENST00000516383 129 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH6P52701 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.5□□□□□ -1.85
MSH6P52701 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH6P52701 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.5□□□□□ -1.85
MSH6P52701 AP001317.1-201ENST00000531194 960 ntBASIC3.5□□□□□ -1.85
MSH6P52701 SNRPGP1-201ENST00000553864 222 ntBASIC3.5□□□□□ -1.85
MSH6P52701 OR4H12P-201ENST00000556269 907 ntBASIC3.5□□□□□ -1.85
MSH6P52701 LINC00557-201ENST00000563184 1279 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.5□□□□□ -1.85
MSH6P52701 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.5□□□□□ -1.85
MSH6P52701 AC068313.1-201ENST00000604028 1008 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC012531.5-201ENST00000611375 151 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC104237.2-201ENST00000612456 443 ntBASIC3.5□□□□□ -1.85
MSH6P52701 AC107308.1-201ENST00000615897 301 ntBASIC3.5□□□□□ -1.85
MSH6P52701 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.5□□□□□ -1.85
MSH6P52701 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MSH6P52701 HPVC1-201ENST00000629899 1198 ntBASIC3.5□□□□□ -1.85
MSH6P52701 FRG1DP-201ENST00000635586 771 ntBASIC3.5□□□□□ -1.85
MSH6P52701 U6.98-201ENST00000637157 84 ntBASIC3.5□□□□□ -1.85
MSH6P52701 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
MSH6P52701 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
MSH6P52701 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MSH6P52701 Y_RNA.226-201ENST00000364337 114 ntBASIC3.49□□□□□ -1.85
MSH6P52701 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH6P52701 RNU2-6P-201ENST00000411404 190 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH6P52701 ARL5AP2-201ENST00000444698 533 ntBASIC3.49□□□□□ -1.85
MSH6P52701 TPTE2P6-202ENST00000445572 1007 ntBASIC3.49□□□□□ -1.85
MSH6P52701 CFTRP1-201ENST00000456646 183 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC089999.1-201ENST00000460336 374 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AP000873.1-201ENST00000463987 400 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC012170.1-201ENST00000495139 359 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH6P52701 AC022790.1-201ENST00000522872 204 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC128657.1-201ENST00000549459 145 ntBASIC3.49□□□□□ -1.85
MSH6P52701 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH6P52701 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH6P52701 BNIP3P8-201ENST00000597863 560 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC103810.6-201ENST00000606708 136 ntBASIC3.49□□□□□ -1.85
MSH6P52701 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH6P52701 AL021368.1-201ENST00000607490 540 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH6P52701 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH6P52701 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
MSH6P52701 AL136981.2-201ENST00000617319 734 ntBASIC3.49□□□□□ -1.85
MSH6P52701 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH6P52701 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH6P52701 AC110994.2-201ENST00000635481 492 ntBASIC3.49□□□□□ -1.85
MSH6P52701 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
MSH6P52701 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH6P52701 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MSH6P52701 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MSH6P52701 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH6P52701 VTA1P1-201ENST00000414044 866 ntBASIC3.48□□□□□ -1.85
MSH6P52701 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.48□□□□□ -1.85
MSH6P52701 AC011816.1-201ENST00000441346 546 ntBASIC3.48□□□□□ -1.85
MSH6P52701 CACYBPP2-201ENST00000453625 678 ntBASIC3.48□□□□□ -1.85
MSH6P52701 RPL9P6-201ENST00000492764 598 ntBASIC3.48□□□□□ -1.85
MSH6P52701 OR4G11P-201ENST00000492842 939 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms