Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.56□□□□□ -1.52
USP11P51784 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.56□□□□□ -1.52
USP11P51784 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 AC022431.1-201ENST00000450941 438 ntBASIC5.56□□□□□ -1.52
USP11P51784 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.56□□□□□ -1.52
USP11P51784 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 RPS3AP41-201ENST00000462701 778 ntBASIC5.56□□□□□ -1.52
USP11P51784 AP005435.4-201ENST00000529514 284 ntBASIC5.56□□□□□ -1.52
USP11P51784 CYCSP28-201ENST00000534284 321 ntBASIC5.56□□□□□ -1.52
USP11P51784 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USP11P51784 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP11P51784 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.56□□□□□ -1.52
USP11P51784 AC004972.1-201ENST00000623934 2209 ntBASIC5.56□□□□□ -1.52
USP11P51784 AL731532.2-201ENST00000623542 1953 ntBASIC5.56□□□□□ -1.52
USP11P51784 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.56□□□□□ -1.52
USP11P51784 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP11P51784 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USP11P51784 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
USP11P51784 AC133552.1-201ENST00000569988 4007 ntBASIC5.56□□□□□ -1.52
USP11P51784 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP11P51784 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 MUC2-202ENST00000613187 4845 ntBASIC5.55□□□□□ -1.52
USP11P51784 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 RNU4-66P-201ENST00000365199 138 ntBASIC5.55□□□□□ -1.52
USP11P51784 Y_RNA.414-201ENST00000384011 101 ntBASIC5.55□□□□□ -1.52
USP11P51784 RNU6-39P-201ENST00000384344 107 ntBASIC5.55□□□□□ -1.52
USP11P51784 RNU6-1222P-201ENST00000384615 107 ntBASIC5.55□□□□□ -1.52
USP11P51784 RPL31P12-201ENST00000422587 358 ntBASIC5.55□□□□□ -1.52
USP11P51784 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 AC092162.1-201ENST00000432828 434 ntBASIC5.55□□□□□ -1.52
USP11P51784 AL160004.2-201ENST00000432935 350 ntBASIC5.55□□□□□ -1.52
USP11P51784 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 PRPS1P1-201ENST00000445305 876 ntBASIC5.55□□□□□ -1.52
USP11P51784 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 AURKAPS2-201ENST00000454983 333 ntBASIC5.55□□□□□ -1.52
USP11P51784 AF213884.1-201ENST00000488102 463 ntBASIC5.55□□□□□ -1.52
USP11P51784 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 MIR4424-201ENST00000585257 86 ntBASIC5.55□□□□□ -1.52
USP11P51784 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.55□□□□□ -1.52
USP11P51784 GLUD1P4-201ENST00000590914 418 ntBASIC5.55□□□□□ -1.52
USP11P51784 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 AL109918.3-201ENST00000603072 338 ntBASIC5.55□□□□□ -1.52
USP11P51784 HSPE1P14-201ENST00000605812 302 ntBASIC5.55□□□□□ -1.52
USP11P51784 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP11P51784 AL049539.1-201ENST00000611964 459 ntBASIC5.55□□□□□ -1.52
USP11P51784 AP001005.3-201ENST00000622049 129 ntBASIC5.55□□□□□ -1.52
USP11P51784 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP11P51784 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP11P51784 SMG1P6-201ENST00000532337 2930 ntBASIC5.55□□□□□ -1.52
USP11P51784 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.55□□□□□ -1.52
USP11P51784 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP11P51784 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 AC083843.2-201ENST00000568248 6253 ntBASIC5.55□□□□□ -1.52
USP11P51784 AC097461.1-201ENST00000568928 2821 ntBASIC5.55□□□□□ -1.52
USP11P51784 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.55□□□□□ -1.52
USP11P51784 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP11P51784 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
USP11P51784 Y_RNA.22-201ENST00000362492 102 ntBASIC5.54□□□□□ -1.52
USP11P51784 SNORA51.6-201ENST00000384151 125 ntBASIC5.54□□□□□ -1.52
USP11P51784 RNU6-903P-201ENST00000391270 109 ntBASIC5.54□□□□□ -1.52
USP11P51784 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 Y_RNA.618-201ENST00000410949 107 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC114755.2-201ENST00000413520 361 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC012065.2-201ENST00000421295 375 ntBASIC5.54□□□□□ -1.52
USP11P51784 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP11P51784 OR4K11P-201ENST00000431829 904 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.54□□□□□ -1.52
USP11P51784 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.54□□□□□ -1.52
USP11P51784 AC005297.2-201ENST00000450430 606 ntBASIC5.54□□□□□ -1.52
USP11P51784 BTF3P15-201ENST00000455606 336 ntBASIC5.54□□□□□ -1.52
USP11P51784 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.54□□□□□ -1.52
USP11P51784 RPL7L1P8-201ENST00000469911 741 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC010655.3-201ENST00000478818 450 ntBASIC5.54□□□□□ -1.52
USP11P51784 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC083904.1-201ENST00000487828 231 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.54□□□□□ -1.52
USP11P51784 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.54□□□□□ -1.52
USP11P51784 RN7SKP295-201ENST00000517264 153 ntBASIC5.54□□□□□ -1.52
USP11P51784 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.54□□□□□ -1.52
USP11P51784 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.54□□□□□ -1.52
USP11P51784 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms