Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-798P-201ENST00000516912 103 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 RNU6-64P-201ENST00000517119 105 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 MIR3934-201ENST00000579806 107 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 MIR3910-1-201ENST00000580936 111 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.16□□□□□ -1.26
PRIM1P49642 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.16□□□□□ -1.26
PRIM1P49642 AC087783.2-201ENST00000605070 562 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 AL590099.1-201ENST00000615276 138 ntBASIC7.16□□□□□ -1.26
PRIM1P49642 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.16□□□□□ -1.26
PRIM1P49642 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRIM1P49642 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
PRIM1P49642 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRIM1P49642 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRIM1P49642 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRIM1P49642 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRIM1P49642 SNORA51.8-201ENST00000384234 132 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 RNU6-662P-201ENST00000384253 104 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 RNU6-1226P-201ENST00000384317 107 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 Y_RNA.473-201ENST00000384333 102 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PRIM1P49642 AC069213.2-201ENST00000420238 366 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC7.15□□□□□ -1.26
PRIM1P49642 AL590632.1-201ENST00000424289 371 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 RPL7P37-201ENST00000425095 738 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 PRELID3BP1-201ENST00000457142 540 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 RPL9P32-201ENST00000464118 620 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 FO393415.2-201ENST00000480085 343 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PRIM1P49642 HMGB3P26-201ENST00000560051 582 ntBASIC7.15□□□□□ -1.26
PRIM1P49642 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC7.15□□□□□ -1.26
PRIM1P49642 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PRIM1P49642 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.15□□□□□ -1.27
PRIM1P49642 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRIM1P49642 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
PRIM1P49642 SOCS5P3-201ENST00000425115 1576 ntBASIC7.15□□□□□ -1.27
PRIM1P49642 AC093775.1-201ENST00000624154 1868 ntBASIC7.15□□□□□ -1.27
PRIM1P49642 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.15□□□□□ -1.27
PRIM1P49642 AC009313.2-201ENST00000417893 1941 ntBASIC7.15□□□□□ -1.27
PRIM1P49642 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.15□□□□□ -1.27
PRIM1P49642 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.15□□□□□ -1.27
PRIM1P49642 AC005224.3-201ENST00000584683 2140 ntBASIC7.15□□□□□ -1.27
PRIM1P49642 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.15□□□□□ -1.27
PRIM1P49642 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRIM1P49642 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
PRIM1P49642 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
PRIM1P49642 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
PRIM1P49642 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 Y_RNA.270-201ENST00000364693 104 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 Y_RNA.577-201ENST00000384794 101 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 RNA5SP107-201ENST00000411358 122 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC097713.2-201ENST00000430199 356 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 USP9YP30-201ENST00000430729 455 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AL353597.2-202ENST00000434901 373 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC005094.1-201ENST00000440420 368 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 RPS29P33-201ENST00000456717 146 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC006463.2-201ENST00000473326 348 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC108860.1-201ENST00000484521 383 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 CEACAMP10-202ENST00000495431 496 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.14□□□□□ -1.27
PRIM1P49642 MTND1P19-201ENST00000511780 315 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.14□□□□□ -1.27
PRIM1P49642 SNORA25.11-201ENST00000515935 105 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 RN7SKP147-201ENST00000517154 244 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PRIM1P49642 DYNLL1P4-201ENST00000549314 266 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 AC008521.1-201ENST00000587471 187 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 NANOGP3-201ENST00000605855 286 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 AL136313.1-201ENST00000624804 202 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 MIR4272-201ENST00000635924 64 ntBASIC7.14□□□□□ -1.27
PRIM1P49642 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PRIM1P49642 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
PRIM1P49642 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRIM1P49642 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 Y_RNA.20-201ENST00000362479 113 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 RN7SKP104-201ENST00000362605 328 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 RNA5SP123-201ENST00000363244 119 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 RNU1-130P-201ENST00000363930 160 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 RNU6-188P-201ENST00000364207 107 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms