Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 AC009220.3-201ENST00000604318 586 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AL137843.1-201ENST00000605078 385 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC067747.1-201ENST00000608026 250 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 AL391834.1-201ENST00000609609 560 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC245517.5-201ENST00000611529 162 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC135507.2-201ENST00000612443 309 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 AC079597.1-201ENST00000624306 508 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SNCAP37840 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.89□□□□□ -2.11
SNCAP37840 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNCAP37840 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SNCAP37840 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 RNA5SP38-201ENST00000410750 119 ntBASIC1.89□□□□□ -2.11
SNCAP37840 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.89□□□□□ -2.11
SNCAP37840 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 AL137014.1-201ENST00000420490 1226 ntBASIC1.89□□□□□ -2.11
SNCAP37840 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.89□□□□□ -2.11
SNCAP37840 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.89□□□□□ -2.11
SNCAP37840 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 RNU7-27P-201ENST00000459281 62 ntBASIC1.89□□□□□ -2.11
SNCAP37840 AC010301.1-201ENST00000473936 355 ntBASIC1.89□□□□□ -2.11
SNCAP37840 MTND3P6-201ENST00000485242 339 ntBASIC1.89□□□□□ -2.11
SNCAP37840 LINC00888-204ENST00000487386 421 ntBASIC1.89□□□□□ -2.11
SNCAP37840 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.89□□□□□ -2.11
SNCAP37840 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNCAP37840 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.89□□□□□ -2.11
SNCAP37840 RN7SKP132-201ENST00000516001 208 ntBASIC1.89□□□□□ -2.11
SNCAP37840 RNA5SP320-201ENST00000516263 124 ntBASIC1.89□□□□□ -2.11
SNCAP37840 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 AC019227.1-201ENST00000526902 510 ntBASIC1.89□□□□□ -2.11
SNCAP37840 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.89□□□□□ -2.11
SNCAP37840 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.89□□□□□ -2.11
SNCAP37840 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.89□□□□□ -2.11
SNCAP37840 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.89□□□□□ -2.11
SNCAP37840 MIR7106-201ENST00000612419 65 ntBASIC1.89□□□□□ -2.11
SNCAP37840 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.89□□□□□ -2.11
SNCAP37840 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.89□□□□□ -2.11
SNCAP37840 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.89□□□□□ -2.11
SNCAP37840 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SNCAP37840 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNCAP37840 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 RNU6-532P-201ENST00000384318 107 ntBASIC1.88□□□□□ -2.11
SNCAP37840 MIR491-201ENST00000384877 84 ntBASIC1.88□□□□□ -2.11
SNCAP37840 RPL7P44-201ENST00000424827 742 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AC091390.3-201ENST00000426478 338 ntBASIC1.88□□□□□ -2.11
SNCAP37840 FCF1P1-201ENST00000432690 571 ntBASIC1.88□□□□□ -2.11
SNCAP37840 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SNCAP37840 AC090515.1-201ENST00000465295 476 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 AC108734.3-201ENST00000481241 1165 ntBASIC1.88□□□□□ -2.11
SNCAP37840 RPL36AP51-201ENST00000487216 318 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.88□□□□□ -2.11
SNCAP37840 AC026436.1-201ENST00000510537 270 ntBASIC1.88□□□□□ -2.11
SNCAP37840 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AC025755.1-201ENST00000521306 278 ntBASIC1.88□□□□□ -2.11
SNCAP37840 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SNCAP37840 AC022690.1-201ENST00000526681 550 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AC021269.2-201ENST00000532318 330 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.88□□□□□ -2.11
SNCAP37840 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.88□□□□□ -2.11
SNCAP37840 BNIP3P33-201ENST00000598912 569 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.88□□□□□ -2.11
SNCAP37840 AC007621.1-201ENST00000604544 437 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AL121917.1-203ENST00000605534 577 ntBASIC1.88□□□□□ -2.11
SNCAP37840 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SNCAP37840 AC245100.7-201ENST00000609678 442 ntBASIC1.88□□□□□ -2.11
SNCAP37840 VN1R74P-201ENST00000613259 503 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AL392048.1-201ENST00000613946 534 ntBASIC1.88□□□□□ -2.11
SNCAP37840 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.88□□□□□ -2.11
SNCAP37840 MIR6864-201ENST00000617935 70 ntBASIC1.88□□□□□ -2.11
SNCAP37840 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 AC092159.4-201ENST00000624944 550 ntBASIC1.88□□□□□ -2.11
SNCAP37840 MIR1291-201ENST00000627649 87 ntBASIC1.88□□□□□ -2.11
SNCAP37840 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNCAP37840 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.88□□□□□ -2.11
SNCAP37840 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SNCAP37840 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SNCAP37840 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
SNCAP37840 RNU6-697P-201ENST00000363348 107 ntBASIC1.87□□□□□ -2.11
SNCAP37840 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.87□□□□□ -2.11
SNCAP37840 SNORA48.2-201ENST00000390926 124 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms