Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 AC068724.1-201ENST00000487100 792 ntBASIC3.04□□□□□ -1.92
RORAP35398 AC093801.2-201ENST00000503966 1050 ntBASIC3.04□□□□□ -1.92
RORAP35398 AC118282.2-201ENST00000508739 374 ntBASIC3.04□□□□□ -1.92
RORAP35398 SNORA31.1-201ENST00000515993 133 ntBASIC3.04□□□□□ -1.92
RORAP35398 SNORA31.5-201ENST00000516190 133 ntBASIC3.04□□□□□ -1.92
RORAP35398 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.04□□□□□ -1.92
RORAP35398 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.04□□□□□ -1.92
RORAP35398 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.04□□□□□ -1.92
RORAP35398 MAGOH2P-202ENST00000584384 429 ntBASIC3.04□□□□□ -1.92
RORAP35398 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.04□□□□□ -1.92
RORAP35398 AC120053.1-201ENST00000607706 736 ntBASIC3.04□□□□□ -1.92
RORAP35398 AC090116.1-201ENST00000615679 446 ntBASIC3.04□□□□□ -1.92
RORAP35398 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 AC018692.3-201ENST00000623929 123 ntBASIC3.04□□□□□ -1.92
RORAP35398 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.04□□□□□ -1.92
RORAP35398 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RORAP35398 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RORAP35398 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.04□□□□□ -1.92
RORAP35398 MTND5P7-201ENST00000413558 1798 ntBASIC3.03□□□□□ -1.92
RORAP35398 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RORAP35398 GNG5P1-201ENST00000255500 204 ntBASIC3.03□□□□□ -1.92
RORAP35398 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RORAP35398 RNU6-989P-201ENST00000362756 107 ntBASIC3.03□□□□□ -1.92
RORAP35398 RNU6-1249P-201ENST00000363237 111 ntBASIC3.03□□□□□ -1.92
RORAP35398 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
RORAP35398 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.03□□□□□ -1.92
RORAP35398 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.03□□□□□ -1.92
RORAP35398 RPL7P44-201ENST00000424827 742 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.03□□□□□ -1.92
RORAP35398 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.03□□□□□ -1.92
RORAP35398 HMGB3P11-201ENST00000440127 604 ntBASIC3.03□□□□□ -1.92
RORAP35398 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AL592437.1-201ENST00000443781 492 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.03□□□□□ -1.92
RORAP35398 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 HMGN1P18-201ENST00000457642 277 ntBASIC3.03□□□□□ -1.92
RORAP35398 RPL7P23-201ENST00000493874 747 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC111000.2-201ENST00000507775 550 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC048346.1-201ENST00000510247 144 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.03□□□□□ -1.92
RORAP35398 AC112198.4-201ENST00000515450 351 ntBASIC3.03□□□□□ -1.92
RORAP35398 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC245166.1-201ENST00000521012 253 ntBASIC3.03□□□□□ -1.92
RORAP35398 AL391156.1-201ENST00000554965 554 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC023825.1-201ENST00000566704 1030 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC106782.4-201ENST00000568264 210 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.92
RORAP35398 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC006539.2-201ENST00000601729 572 ntBASIC3.03□□□□□ -1.92
RORAP35398 RPAP2P1-201ENST00000603626 1168 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC135507.2-201ENST00000612443 309 ntBASIC3.03□□□□□ -1.92
RORAP35398 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.03□□□□□ -1.92
RORAP35398 AC091046.2-201ENST00000620775 665 ntBASIC3.03□□□□□ -1.92
RORAP35398 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RORAP35398 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.03□□□□□ -1.92
RORAP35398 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.03□□□□□ -1.92
RORAP35398 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.03□□□□□ -1.92
RORAP35398 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
RORAP35398 U3.11-201ENST00000364476 212 ntBASIC3.02□□□□□ -1.93
RORAP35398 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.02□□□□□ -1.93
RORAP35398 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
RORAP35398 FCF1P2-201ENST00000415284 583 ntBASIC3.02□□□□□ -1.93
RORAP35398 OR4K6P-201ENST00000416478 897 ntBASIC3.02□□□□□ -1.93
RORAP35398 RPL21P32-201ENST00000419877 477 ntBASIC3.02□□□□□ -1.93
RORAP35398 FNDC3CP-201ENST00000420795 1155 ntBASIC3.02□□□□□ -1.93
RORAP35398 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.02□□□□□ -1.93
RORAP35398 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RORAP35398 AC244505.4-201ENST00000434905 287 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.02□□□□□ -1.93
RORAP35398 SSXP5-201ENST00000443473 287 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC004022.1-201ENST00000447766 1066 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.02□□□□□ -1.93
RORAP35398 NDUFA5P7-201ENST00000452914 242 ntBASIC3.02□□□□□ -1.93
RORAP35398 RPS17P11-201ENST00000474297 293 ntBASIC3.02□□□□□ -1.93
RORAP35398 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.02□□□□□ -1.93
RORAP35398 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.02□□□□□ -1.93
RORAP35398 ARL4AP2-201ENST00000507378 601 ntBASIC3.02□□□□□ -1.93
RORAP35398 RNU6-885P-201ENST00000516607 104 ntBASIC3.02□□□□□ -1.93
RORAP35398 AP003066.2-201ENST00000529375 555 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC092451.2-201ENST00000538746 658 ntBASIC3.02□□□□□ -1.93
RORAP35398 LSM6P2-201ENST00000552208 177 ntBASIC3.02□□□□□ -1.93
RORAP35398 MIR4666A-201ENST00000580160 79 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms