Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC13P31276 GTF2IP23-201ENST00000423746 351 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC006480.1-201ENST00000449887 378 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC008155.2-201ENST00000464337 397 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC092757.1-201ENST00000467293 467 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC108734.3-201ENST00000481241 1165 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AP000563.1-201ENST00000490865 758 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 Y_RNA.655-201ENST00000515919 96 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AP001207.2-201ENST00000519490 539 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC087481.2-201ENST00000565492 330 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC005000.2-201ENST00000605468 310 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AP001521.1-201ENST00000609150 300 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC013562.2-201ENST00000611632 603 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC068831.7-201ENST00000616954 363 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 AC078883.4-201ENST00000623218 367 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 AC095031.1-201ENST00000623685 672 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC13P31276 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC13P31276 MIR3651-201ENST00000630427 90 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC13P31276 MAPK10-373ENST00000641983 6772 ntBASIC3.89□□□□□ -1.79
HOXC13P31276 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC13P31276 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC13P31276 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HOXC13P31276 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXC13P31276 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 ZNF29P-201ENST00000225587 168 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MIR506-201ENST00000384998 124 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 SKINT1L-201ENST00000401057 817 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 RNU2-42P-201ENST00000410697 113 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 VN1R10P-201ENST00000447106 875 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 USP9YP10-201ENST00000454868 628 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 ARPC3P2-201ENST00000457786 533 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC010342.1-201ENST00000514047 877 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 SNORA31.8-201ENST00000516327 108 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 Y_RNA.688-201ENST00000516565 95 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC13P31276 AP001804.3-201ENST00000525146 880 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC007834.2-201ENST00000536310 343 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC010198.2-201ENST00000550612 259 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 EEF1B2P4-201ENST00000551398 348 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MTCYBP23-201ENST00000558717 1102 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC006960.3-201ENST00000561845 705 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 MTND3P13-201ENST00000574391 343 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC13P31276 MIR4509-3-201ENST00000578671 94 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MIR5195-201ENST00000583555 115 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MIR4509-2-201ENST00000583920 94 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC061975.8-201ENST00000587058 721 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AL138478.1-201ENST00000612252 832 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AC024257.5-201ENST00000612739 531 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MIR4509-1-201ENST00000618224 94 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC13P31276 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC13P31276 CYP3A51P-201ENST00000633513 256 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 AL392088.2-201ENST00000637607 285 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC13P31276 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC13P31276 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 AC107982.1-201ENST00000507171 1300 ntBASIC3.88□□□□□ -1.79
HOXC13P31276 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC13P31276 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms