Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 OR4G2P-202ENST00000641004 1759 ntBASIC3.23□□□□□ -1.89
CLIP1P30622 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CLIP1P30622 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP1P30622 RN7SKP226-201ENST00000364912 300 ntBASIC3.22□□□□□ -1.89
CLIP1P30622 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP1P30622 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLIP1P30622 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP1P30622 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP1P30622 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.22□□□□□ -1.89
CLIP1P30622 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP1P30622 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP1P30622 SNRPGP3-201ENST00000469405 227 ntBASIC3.22□□□□□ -1.89
CLIP1P30622 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP1P30622 MTND5P4-201ENST00000514978 288 ntBASIC3.22□□□□□ -1.89
CLIP1P30622 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.22□□□□□ -1.89
CLIP1P30622 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP1P30622 AC011494.1-201ENST00000596454 237 ntBASIC3.22□□□□□ -1.89
CLIP1P30622 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP1P30622 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
CLIP1P30622 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLIP1P30622 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP1P30622 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP1P30622 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP1P30622 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLIP1P30622 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 AL353597.2-202ENST00000434901 373 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP1P30622 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP1P30622 AP000852.1-201ENST00000472460 573 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP1P30622 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP1P30622 AC068339.2-201ENST00000534395 618 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 AK6P1-201ENST00000540219 478 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP1P30622 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP1P30622 GABPAP-201ENST00000419271 1356 ntBASIC3.21□□□□□ -1.9
CLIP1P30622 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP1P30622 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLIP1P30622 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLIP1P30622 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP1P30622 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIP1P30622 AC009237.8-201ENST00000445492 379 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP1P30622 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 AC087190.1-201ENST00000484462 480 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 OR52A4P-203ENST00000498233 1014 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP1P30622 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP1P30622 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP1P30622 AC034268.2-201ENST00000571784 482 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP1P30622 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP1P30622 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIP1P30622 DCAF13P3-201ENST00000561147 1334 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.2□□□□□ -1.9
CLIP1P30622 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP1P30622 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLIP1P30622 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLIP1P30622 MTCO3P30-201ENST00000426425 670 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.19□□□□□ -1.9
CLIP1P30622 MTND5P28-201ENST00000438005 1594 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 CBWD4P-201ENST00000445695 655 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 FAM92A1P2-202ENST00000504766 877 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 HSPA8P4-201ENST00000511877 1920 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.19□□□□□ -1.9
CLIP1P30622 AC104986.1-201ENST00000517978 436 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.19□□□□□ -1.9
CLIP1P30622 OR8X1P-201ENST00000534542 869 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC016877.3-201ENST00000606778 504 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC131902.3-201ENST00000611767 581 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.19□□□□□ -1.9
CLIP1P30622 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLIP1P30622 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLIP1P30622 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.19□□□□□ -1.9
CLIP1P30622 FNDC3CP-201ENST00000420795 1155 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AL035551.1-201ENST00000446931 348 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC090071.1-201ENST00000507713 644 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.19□□□□□ -1.9
CLIP1P30622 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
CLIP1P30622 AC025125.1-201ENST00000624743 1922 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 AC007256.1-201ENST00000392253 2765 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 RLIMP2-201ENST00000427891 1563 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 AL353746.1-201ENST00000566293 6881 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLIP1P30622 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLIP1P30622 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLIP1P30622 MIR583-201ENST00000384846 75 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.18□□□□□ -1.9
CLIP1P30622 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLIP1P30622 AP000942.3-201ENST00000603702 160 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 SNRPGP19-201ENST00000603826 189 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.18□□□□□ -1.9
CLIP1P30622 AC048347.1-201ENST00000624621 427 ntBASIC3.18□□□□□ -1.9
CLIP1P30622 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
CLIP1P30622 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLIP1P30622 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLIP1P30622 AL161781.1-201ENST00000354277 403 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms