Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 AC005832.2-201ENST00000538921 1430 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ABCD3P28288 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ABCD3P28288 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.84□□□□□ -1.8
ABCD3P28288 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ABCD3P28288 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 DEFB109C-201ENST00000382575 264 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 DEFB109B-201ENST00000382656 264 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 SNORA70C-201ENST00000384538 135 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ABCD3P28288 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ABCD3P28288 RPS26P8-201ENST00000393490 348 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ABCD3P28288 AL021407.1-201ENST00000404531 386 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 RN7SKP33-201ENST00000410942 340 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 RNU6-516P-201ENST00000411381 104 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCD3P28288 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 MTATP6P4-201ENST00000427725 675 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC024082.2-201ENST00000434771 238 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 HLA-N-201ENST00000437516 135 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 GDI2P2-201ENST00000445131 608 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 MTCO1P42-201ENST00000457379 726 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCD3P28288 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCD3P28288 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ABCD3P28288 AP000797.1-201ENST00000478870 387 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 RN7SL604P-201ENST00000492589 296 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 RPL7P24-201ENST00000493052 752 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 NIPA2P2-201ENST00000496376 1083 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCD3P28288 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 IFITM8P-201ENST00000522529 394 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 AC025884.1-201ENST00000556034 378 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 MED28P6-201ENST00000558776 231 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.83□□□□□ -1.8
ABCD3P28288 CYP4A43P-201ENST00000568156 121 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC136624.4-201ENST00000573044 370 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCD3P28288 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ABCD3P28288 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
ABCD3P28288 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 MIR432-201ENST00000606207 94 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 AL450472.3-201ENST00000615578 367 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC103858.2-201ENST00000621471 543 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AL359715.5-201ENST00000623431 443 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AC026422.1-201ENST00000623961 452 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 AL513185.3-201ENST00000433335 1300 ntBASIC3.83□□□□□ -1.8
ABCD3P28288 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ABCD3P28288 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ABCD3P28288 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ABCD3P28288 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 AL121657.1-201ENST00000327215 531 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RNU6-223P-201ENST00000362830 107 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 SNORD116-2-201ENST00000384274 95 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 SNORD116-6-201ENST00000384711 96 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RNU6-754P-201ENST00000391166 107 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.82□□□□□ -1.8
ABCD3P28288 HMGN1P24-201ENST00000412282 298 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.82□□□□□ -1.8
ABCD3P28288 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 AC090774.1-201ENST00000435925 246 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RPL7P28-201ENST00000437739 740 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RPS27AP8-201ENST00000452665 445 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 SNRPFP4-201ENST00000456366 242 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RPL36AP13-201ENST00000457490 317 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 OR9M1P-201ENST00000459641 921 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC010468.1-201ENST00000461022 817 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 RPL7P19-201ENST00000469948 618 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms