Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.683-201ENST00000516508 93 ntBASIC6□□□□□ -1.45
VARSP26640 SCARNA21.2-201ENST00000516600 166 ntBASIC6□□□□□ -1.45
VARSP26640 Y_RNA.710-201ENST00000516975 110 ntBASIC6□□□□□ -1.45
VARSP26640 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 IGKV3D-34-201ENST00000522638 302 ntBASIC6□□□□□ -1.45
VARSP26640 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6□□□□□ -1.45
VARSP26640 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 HIGD1AP5-201ENST00000529959 259 ntBASIC6□□□□□ -1.45
VARSP26640 AP002392.1-201ENST00000537692 208 ntBASIC6□□□□□ -1.45
VARSP26640 AC092470.1-201ENST00000546187 132 ntBASIC6□□□□□ -1.45
VARSP26640 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6□□□□□ -1.45
VARSP26640 AC004584.2-201ENST00000570407 410 ntBASIC6□□□□□ -1.45
VARSP26640 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6□□□□□ -1.45
VARSP26640 RPSAP75-201ENST00000605848 301 ntBASIC6□□□□□ -1.45
VARSP26640 AL512652.1-201ENST00000619006 500 ntBASIC6□□□□□ -1.45
VARSP26640 AL161637.1-201ENST00000622380 412 ntBASIC6□□□□□ -1.45
VARSP26640 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6□□□□□ -1.45
VARSP26640 AL591135.1-201ENST00000401578 5914 ntBASIC6□□□□□ -1.45
VARSP26640 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6□□□□□ -1.45
VARSP26640 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
VARSP26640 PANDAR-201ENST00000629595 1506 ntBASIC5.99□□□□□ -1.45
VARSP26640 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VARSP26640 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VARSP26640 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VARSP26640 RNU6-1266P-201ENST00000362794 105 ntBASIC5.99□□□□□ -1.45
VARSP26640 RN7SKP78-201ENST00000364711 318 ntBASIC5.99□□□□□ -1.45
VARSP26640 RNU6-1303P-201ENST00000364841 107 ntBASIC5.99□□□□□ -1.45
VARSP26640 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VARSP26640 MRPL35P1-201ENST00000404272 572 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.99□□□□□ -1.45
VARSP26640 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 RPS29P14-201ENST00000431518 171 ntBASIC5.99□□□□□ -1.45
VARSP26640 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 RPL10P17-201ENST00000453852 316 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC022034.3-201ENST00000471393 478 ntBASIC5.99□□□□□ -1.45
VARSP26640 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 RN7SL284P-201ENST00000498823 275 ntBASIC5.99□□□□□ -1.45
VARSP26640 KHDC1P1-201ENST00000511053 508 ntBASIC5.99□□□□□ -1.45
VARSP26640 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.99□□□□□ -1.45
VARSP26640 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 CBX3P4-201ENST00000538909 354 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC004024.1-201ENST00000549244 247 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 AMZ2P1-203ENST00000565833 850 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 SDR42E1P1-201ENST00000611327 477 ntBASIC5.99□□□□□ -1.45
VARSP26640 AC091953.5-201ENST00000622919 233 ntBASIC5.99□□□□□ -1.45
VARSP26640 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.99□□□□□ -1.45
VARSP26640 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
VARSP26640 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.99□□□□□ -1.45
VARSP26640 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VARSP26640 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VARSP26640 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.98□□□□□ -1.45
VARSP26640 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VARSP26640 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
VARSP26640 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VARSP26640 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VARSP26640 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VARSP26640 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.98□□□□□ -1.45
VARSP26640 RNU6-637P-201ENST00000384050 107 ntBASIC5.98□□□□□ -1.45
VARSP26640 RNU6-45P-201ENST00000384471 107 ntBASIC5.98□□□□□ -1.45
VARSP26640 MIR92A2-201ENST00000385299 75 ntBASIC5.98□□□□□ -1.45
VARSP26640 SNRPEP6-201ENST00000407465 277 ntBASIC5.98□□□□□ -1.45
VARSP26640 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.98□□□□□ -1.45
VARSP26640 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.98□□□□□ -1.45
VARSP26640 EIF4EP2-201ENST00000422816 654 ntBASIC5.98□□□□□ -1.45
VARSP26640 AC092423.1-201ENST00000430165 186 ntBASIC5.98□□□□□ -1.45
VARSP26640 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms