Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 API5P2-201ENST00000397055 1498 ntBASIC4.4□□□□□ -1.71
CD40P25942 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CD40P25942 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD40P25942 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
CD40P25942 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 AC116667.1-201ENST00000604855 2072 ntBASIC4.39□□□□□ -1.71
CD40P25942 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.39□□□□□ -1.71
CD40P25942 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.39□□□□□ -1.71
CD40P25942 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 Y_RNA.166-201ENST00000363730 102 ntBASIC4.39□□□□□ -1.71
CD40P25942 RN7SKP103-201ENST00000363848 320 ntBASIC4.39□□□□□ -1.71
CD40P25942 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 RNU6-946P-201ENST00000383878 107 ntBASIC4.39□□□□□ -1.71
CD40P25942 SNORA2.3-201ENST00000383920 135 ntBASIC4.39□□□□□ -1.71
CD40P25942 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
CD40P25942 NDUFS5P1-201ENST00000405668 289 ntBASIC4.39□□□□□ -1.71
CD40P25942 AL356432.1-201ENST00000405809 419 ntBASIC4.39□□□□□ -1.71
CD40P25942 GPS2P1-201ENST00000411761 986 ntBASIC4.39□□□□□ -1.71
CD40P25942 CHEK2P3-201ENST00000416118 248 ntBASIC4.39□□□□□ -1.71
CD40P25942 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 RPS23P10-201ENST00000416185 486 ntBASIC4.39□□□□□ -1.71
CD40P25942 AL353678.1-201ENST00000422735 741 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC079780.1-201ENST00000428259 207 ntBASIC4.39□□□□□ -1.71
CD40P25942 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.39□□□□□ -1.71
CD40P25942 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.39□□□□□ -1.71
CD40P25942 SNRPFP3-201ENST00000457792 225 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC091180.1-201ENST00000462104 372 ntBASIC4.39□□□□□ -1.71
CD40P25942 RPL23AP55-201ENST00000498163 452 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC010350.1-201ENST00000504908 231 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 AC104806.1-201ENST00000508720 308 ntBASIC4.39□□□□□ -1.71
CD40P25942 Y_RNA.675-201ENST00000516389 149 ntBASIC4.39□□□□□ -1.71
CD40P25942 RNA5SP43-201ENST00000516559 110 ntBASIC4.39□□□□□ -1.71
CD40P25942 RNU6-1314P-201ENST00000517139 104 ntBASIC4.39□□□□□ -1.71
CD40P25942 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.39□□□□□ -1.71
CD40P25942 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.39□□□□□ -1.71
CD40P25942 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 AC010680.3-201ENST00000604215 520 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 AP001486.3-201ENST00000615334 372 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC131238.1-201ENST00000617135 328 ntBASIC4.39□□□□□ -1.71
CD40P25942 AC068831.8-201ENST00000620171 435 ntBASIC4.39□□□□□ -1.71
CD40P25942 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CD40P25942 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.39□□□□□ -1.71
CD40P25942 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.39□□□□□ -1.71
CD40P25942 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.39□□□□□ -1.71
CD40P25942 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD40P25942 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD40P25942 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.38□□□□□ -1.71
CD40P25942 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CD40P25942 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD40P25942 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD40P25942 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD40P25942 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD40P25942 RN7SKP95-201ENST00000362860 303 ntBASIC4.38□□□□□ -1.71
CD40P25942 RNU6-1287P-201ENST00000362914 107 ntBASIC4.38□□□□□ -1.71
CD40P25942 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
CD40P25942 RNU6-38P-201ENST00000384085 107 ntBASIC4.38□□□□□ -1.71
CD40P25942 Y_RNA.509-201ENST00000384506 99 ntBASIC4.38□□□□□ -1.71
CD40P25942 RNU6-1060P-201ENST00000384664 107 ntBASIC4.38□□□□□ -1.71
CD40P25942 COX6B1P1-201ENST00000415962 213 ntBASIC4.38□□□□□ -1.71
CD40P25942 AC119751.6-201ENST00000416712 186 ntBASIC4.38□□□□□ -1.71
CD40P25942 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.38□□□□□ -1.71
CD40P25942 AL365400.1-201ENST00000431854 640 ntBASIC4.38□□□□□ -1.71
CD40P25942 AC006466.1-201ENST00000438721 289 ntBASIC4.38□□□□□ -1.71
CD40P25942 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.38□□□□□ -1.71
CD40P25942 AL590639.1-201ENST00000456484 337 ntBASIC4.38□□□□□ -1.71
CD40P25942 RNU6-333P-201ENST00000459117 107 ntBASIC4.38□□□□□ -1.71
CD40P25942 RNU7-180P-201ENST00000459240 63 ntBASIC4.38□□□□□ -1.71
CD40P25942 SNORD108-201ENST00000459332 71 ntBASIC4.38□□□□□ -1.71
CD40P25942 RPS3AP41-201ENST00000462701 778 ntBASIC4.38□□□□□ -1.71
CD40P25942 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.38□□□□□ -1.71
CD40P25942 RN7SL319P-201ENST00000480656 221 ntBASIC4.38□□□□□ -1.71
CD40P25942 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.38□□□□□ -1.71
CD40P25942 RNU6-840P-201ENST00000517275 65 ntBASIC4.38□□□□□ -1.71
CD40P25942 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms