Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 MIR4504-201ENST00000577413 92 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC090312.2-201ENST00000582687 378 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 AL035413.2-201ENST00000604801 525 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AL139022.2-201ENST00000606934 443 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC096586.1-201ENST00000610267 561 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC073348.1-201ENST00000623002 331 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC084035.1-201ENST00000634543 607 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL8A2P25067 API5P2-201ENST00000397055 1498 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL8A2P25067 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 RNU6-543P-201ENST00000362576 108 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 RNU6-207P-201ENST00000384137 107 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 RNU6-1257P-201ENST00000384625 110 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 MIR181A2-201ENST00000384863 110 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 MIR620-201ENST00000385232 95 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL8A2P25067 RPL31P1-201ENST00000398116 372 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 BOLA3P4-201ENST00000418151 400 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC244098.2-201ENST00000422068 99 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC093151.1-201ENST00000427711 313 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 RPL36P19-201ENST00000430744 301 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 HSFY7P-201ENST00000432672 318 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 RPL21P112-201ENST00000434403 463 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.37□□□□□ -2.03
COL8A2P25067 HSFY8P-201ENST00000437934 318 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC092170.1-201ENST00000440211 356 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 TRIM60P18-201ENST00000441518 828 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 HSFY3P-201ENST00000444242 1191 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC233982.1-201ENST00000451247 436 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 HSFY5P-201ENST00000453726 309 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC104308.1-201ENST00000454621 333 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 GTF2IP12-201ENST00000456547 356 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC104108.1-201ENST00000509930 412 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 RN7SKP244-201ENST00000516513 307 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 HMGB1P1-201ENST00000522557 636 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC083923.1-201ENST00000523708 376 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.37□□□□□ -2.03
COL8A2P25067 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
COL8A2P25067 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL8A2P25067 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC034105.3-201ENST00000565294 442 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 MIR4319-201ENST00000577285 85 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 MIR4474-201ENST00000579189 78 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC090616.5-202ENST00000582111 297 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 RN7SL622P-201ENST00000585292 275 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.37□□□□□ -2.03
COL8A2P25067 SNRPGP15-201ENST00000600149 222 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC006023.1-201ENST00000603944 259 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AL009028.1-201ENST00000604895 802 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 ATP1B3P1-201ENST00000605365 821 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC144521.1-201ENST00000607148 956 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC097504.2-201ENST00000608088 454 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
COL8A2P25067 AC006213.4-201ENST00000616184 634 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 U73479.1-201ENST00000618062 168 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AC007275.1-201ENST00000621243 671 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 AL590396.2-201ENST00000636511 1041 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL8A2P25067 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.37□□□□□ -2.03
COL8A2P25067 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL8A2P25067 ZNF849P-201ENST00000594711 1566 ntBASIC2.36□□□□□ -2.03
COL8A2P25067 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
COL8A2P25067 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.36□□□□□ -2.03
COL8A2P25067 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.36□□□□□ -2.03
COL8A2P25067 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.36□□□□□ -2.03
COL8A2P25067 AC092593.1-201ENST00000515413 1815 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms