Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.72□□□□□ -2.13
APCP25054 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
APCP25054 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
APCP25054 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.72□□□□□ -2.13
APCP25054 RNU6-6P-201ENST00000606623 107 ntBASIC1.72□□□□□ -2.13
APCP25054 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.72□□□□□ -2.13
APCP25054 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.72□□□□□ -2.13
APCP25054 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
APCP25054 AC093151.1-201ENST00000427711 313 ntBASIC1.72□□□□□ -2.13
APCP25054 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.72□□□□□ -2.13
APCP25054 NAMPTP2-201ENST00000505629 1115 ntBASIC1.72□□□□□ -2.13
APCP25054 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 AC008264.2-201ENST00000610193 3731 ntBASIC1.72□□□□□ -2.13
APCP25054 API5P2-201ENST00000397055 1498 ntBASIC1.72□□□□□ -2.13
APCP25054 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APCP25054 MTCO3P31-201ENST00000405526 789 ntBASIC1.72□□□□□ -2.13
APCP25054 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
APCP25054 RPS7P5-201ENST00000441482 581 ntBASIC1.72□□□□□ -2.13
APCP25054 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.72□□□□□ -2.13
APCP25054 RPL9P33-201ENST00000484311 566 ntBASIC1.72□□□□□ -2.13
APCP25054 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.72□□□□□ -2.13
APCP25054 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.72□□□□□ -2.13
APCP25054 OOSP1P2-201ENST00000579644 351 ntBASIC1.72□□□□□ -2.13
APCP25054 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.72□□□□□ -2.13
APCP25054 WISP1-OT1-201ENST00000602893 642 ntBASIC1.72□□□□□ -2.13
APCP25054 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APCP25054 LRRC77P-213ENST00000637727 880 ntBASIC1.72□□□□□ -2.13
APCP25054 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.71□□□□□ -2.14
APCP25054 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
APCP25054 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APCP25054 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
APCP25054 RNY1-201ENST00000364228 113 ntBASIC1.71□□□□□ -2.14
APCP25054 RNU6-356P-201ENST00000384140 107 ntBASIC1.71□□□□□ -2.14
APCP25054 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
APCP25054 AC012498.1-201ENST00000424037 437 ntBASIC1.71□□□□□ -2.14
APCP25054 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.71□□□□□ -2.14
APCP25054 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.71□□□□□ -2.14
APCP25054 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APCP25054 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APCP25054 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.71□□□□□ -2.14
APCP25054 AC234781.4-201ENST00000419384 244 ntBASIC1.71□□□□□ -2.14
APCP25054 AL159169.1-201ENST00000421119 127 ntBASIC1.71□□□□□ -2.14
APCP25054 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.71□□□□□ -2.14
APCP25054 RNA5SP76-201ENST00000516277 87 ntBASIC1.71□□□□□ -2.14
APCP25054 AF186190.1-201ENST00000517470 480 ntBASIC1.71□□□□□ -2.14
APCP25054 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.71□□□□□ -2.14
APCP25054 HMGN2P28-201ENST00000606102 262 ntBASIC1.71□□□□□ -2.14
APCP25054 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.71□□□□□ -2.14
APCP25054 AC092650.2-201ENST00000619984 902 ntBASIC1.71□□□□□ -2.14
APCP25054 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.71□□□□□ -2.14
APCP25054 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.7□□□□□ -2.14
APCP25054 AL137159.1-201ENST00000452808 512 ntBASIC1.7□□□□□ -2.14
APCP25054 SNRPFP4-201ENST00000456366 242 ntBASIC1.7□□□□□ -2.14
APCP25054 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
APCP25054 AC011352.3-201ENST00000505162 593 ntBASIC1.7□□□□□ -2.14
APCP25054 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
APCP25054 AP000889.2-201ENST00000532684 490 ntBASIC1.7□□□□□ -2.14
APCP25054 MIR6895-201ENST00000613497 78 ntBASIC1.7□□□□□ -2.14
APCP25054 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
APCP25054 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.7□□□□□ -2.14
APCP25054 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.7□□□□□ -2.14
APCP25054 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
APCP25054 RNU6-249P-201ENST00000363016 102 ntBASIC1.7□□□□□ -2.14
APCP25054 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.7□□□□□ -2.14
APCP25054 NDUFB4P5-201ENST00000415445 361 ntBASIC1.7□□□□□ -2.14
APCP25054 AC104332.2-201ENST00000429959 156 ntBASIC1.7□□□□□ -2.14
APCP25054 AL353597.2-202ENST00000434901 373 ntBASIC1.7□□□□□ -2.14
APCP25054 AC092473.1-201ENST00000441098 221 ntBASIC1.7□□□□□ -2.14
APCP25054 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.7□□□□□ -2.14
APCP25054 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.7□□□□□ -2.14
APCP25054 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.7□□□□□ -2.14
APCP25054 CYP3A51P-201ENST00000633513 256 ntBASIC1.7□□□□□ -2.14
APCP25054 MIR3199-2-201ENST00000636243 86 ntBASIC1.7□□□□□ -2.14
APCP25054 MTND4P35-201ENST00000604257 1375 ntBASIC1.69□□□□□ -2.14
APCP25054 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
APCP25054 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
APCP25054 RNU6-342P-201ENST00000384521 104 ntBASIC1.69□□□□□ -2.14
APCP25054 MIR3074-201ENST00000384885 81 ntBASIC1.69□□□□□ -2.14
APCP25054 RNU2-6P-201ENST00000411404 190 ntBASIC1.69□□□□□ -2.14
APCP25054 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.69□□□□□ -2.14
APCP25054 AC092991.1-201ENST00000477176 376 ntBASIC1.69□□□□□ -2.14
APCP25054 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.69□□□□□ -2.14
APCP25054 AP003467.2-201ENST00000520175 319 ntBASIC1.69□□□□□ -2.14
APCP25054 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.69□□□□□ -2.14
APCP25054 RPAP2P1-201ENST00000603626 1168 ntBASIC1.69□□□□□ -2.14
APCP25054 SNRPGP19-201ENST00000603826 189 ntBASIC1.69□□□□□ -2.14
APCP25054 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.69□□□□□ -2.14
APCP25054 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
APCP25054 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
APCP25054 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APCP25054 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
APCP25054 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APCP25054 AC092881.1-201ENST00000638218 2733 ntBASIC1.69□□□□□ -2.14
APCP25054 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
APCP25054 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
APCP25054 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms