Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC107982.1-201ENST00000507171 1300 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC109315.1-201ENST00000584143 1347 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC110774.1-201ENST00000623567 2018 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RNA5SP119-201ENST00000362715 117 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 SNORA62.3-201ENST00000365110 153 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RNU6-1074P-201ENST00000383995 104 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 SNORD116-12-201ENST00000384468 92 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC007066.1-201ENST00000392902 381 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL7P60-201ENST00000397636 735 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC025750.1-201ENST00000399891 379 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL5P18-201ENST00000406671 891 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RN7SKP159-201ENST00000410657 292 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL035423.1-201ENST00000420331 213 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL21P2-201ENST00000440049 481 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 MTCO1P53-201ENST00000441633 699 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL21P133-201ENST00000443666 476 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL39P40-201ENST00000445481 146 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RPL39P6-201ENST00000448289 150 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RFC5P1-201ENST00000454419 874 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 FCF1P6-201ENST00000456841 595 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 snoU109.4-201ENST00000458953 143 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 MTCO3P35-201ENST00000485582 781 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC010374.2-201ENST00000512933 535 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 GMPSP1-201ENST00000514075 579 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 RNU6-1225P-201ENST00000516336 65 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL157394.1-201ENST00000562983 1224 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC015688.2-201ENST00000584523 262 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC245036.5-201ENST00000596330 847 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 BNIP3P27-201ENST00000599991 412 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC069545.1-201ENST00000605671 358 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AL138478.1-201ENST00000612252 832 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC024257.5-201ENST00000612739 531 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC023158.2-201ENST00000614876 543 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC119674.1-207ENST00000641355 633 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 AC092447.7-201ENST00000422212 1621 ntBASIC2.41□□□□□ -2.02
HLA-DQA1P01909 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DQA1P01909 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQA1P01909 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQA1P01909 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DQA1P01909 MTND4P34-201ENST00000572715 1371 ntBASIC2.4□□□□□ -2.02
HLA-DQA1P01909 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RN7SKP280-201ENST00000364196 304 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 SNORD51-201ENST00000384320 80 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MIR506-201ENST00000384998 124 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MIR620-201ENST00000385232 95 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RN7SKP111-201ENST00000410349 271 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RNA5SP274-201ENST00000410484 108 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RNU2-47P-201ENST00000410649 186 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 YPEL5P1-201ENST00000419731 367 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MRPS36P1-201ENST00000421291 307 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AL139281.1-201ENST00000422120 335 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 DUTP6-201ENST00000425573 462 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 NANOGP2-201ENST00000435391 727 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 HMGN2P20-201ENST00000437531 273 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC092427.1-201ENST00000439177 601 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RPS12P18-201ENST00000442381 270 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 NOTCH2P1-201ENST00000443481 624 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 MTND2P19-201ENST00000449129 1012 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC005297.2-201ENST00000450430 606 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 RPL7P15-201ENST00000461190 712 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC108734.3-201ENST00000481241 1165 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC006483.1-201ENST00000487308 313 ntBASIC2.4□□□□□ -2.03
HLA-DQA1P01909 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DQA1P01909 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms