Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR491-201ENST00000384877 84 ntBASIC3.78□□□□□ -1.8
LDLRP01130 RNU11-4P-201ENST00000391149 133 ntBASIC3.78□□□□□ -1.8
LDLRP01130 PIGPP2-201ENST00000411569 458 ntBASIC3.78□□□□□ -1.8
LDLRP01130 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
LDLRP01130 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.78□□□□□ -1.8
LDLRP01130 AL138799.3-201ENST00000438968 350 ntBASIC3.78□□□□□ -1.8
LDLRP01130 MTCYBP3-201ENST00000445588 1137 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AL606662.1-201ENST00000445763 553 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.78□□□□□ -1.8
LDLRP01130 RPL26P28-201ENST00000451325 435 ntBASIC3.78□□□□□ -1.8
LDLRP01130 ANP32BP2-201ENST00000454525 545 ntBASIC3.78□□□□□ -1.8
LDLRP01130 DNAJC19P1-201ENST00000455312 319 ntBASIC3.78□□□□□ -1.8
LDLRP01130 RPS20P32-201ENST00000456044 356 ntBASIC3.78□□□□□ -1.8
LDLRP01130 SYPL1P1-201ENST00000473622 768 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC078817.1-201ENST00000492623 435 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AP001086.1-201ENST00000494882 321 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC108078.3-201ENST00000502633 489 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
LDLRP01130 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.78□□□□□ -1.8
LDLRP01130 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.78□□□□□ -1.8
LDLRP01130 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC008802.1-201ENST00000519121 791 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.78□□□□□ -1.8
LDLRP01130 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.78□□□□□ -1.8
LDLRP01130 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.78□□□□□ -1.8
LDLRP01130 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
LDLRP01130 ZNF415P1-201ENST00000582279 1166 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC090616.2-202ENST00000584248 222 ntBASIC3.78□□□□□ -1.8
LDLRP01130 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 AP003465.2-201ENST00000602571 373 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC007687.1-201ENST00000602704 304 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC078795.2-201ENST00000602835 1252 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.78□□□□□ -1.8
LDLRP01130 AL163642.2-201ENST00000604722 1019 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AP002360.4-201ENST00000606980 481 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AL513477.2-201ENST00000607858 568 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AL159169.3-201ENST00000608871 561 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC096577.2-201ENST00000611455 153 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC122133.1-201ENST00000613964 233 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC073968.1-201ENST00000618594 637 ntBASIC3.78□□□□□ -1.8
LDLRP01130 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 AC092192.1-201ENST00000633154 1018 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 AC066616.2-201ENST00000559334 1481 ntBASIC3.78□□□□□ -1.8
LDLRP01130 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 AP002907.1-201ENST00000606361 1430 ntBASIC3.78□□□□□ -1.8
LDLRP01130 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LDLRP01130 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDLRP01130 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDLRP01130 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDLRP01130 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.77□□□□□ -1.81
LDLRP01130 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LDLRP01130 AL391994.1-201ENST00000254724 282 ntBASIC3.77□□□□□ -1.81
LDLRP01130 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LDLRP01130 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LDLRP01130 RNU6-374P-201ENST00000364146 108 ntBASIC3.77□□□□□ -1.81
LDLRP01130 RNVU1-3-201ENST00000364313 161 ntBASIC3.77□□□□□ -1.81
LDLRP01130 Y_RNA.559-201ENST00000384686 107 ntBASIC3.77□□□□□ -1.81
LDLRP01130 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 C8orf59P1-201ENST00000429930 303 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AC129850.1-201ENST00000436203 508 ntBASIC3.77□□□□□ -1.81
LDLRP01130 RPS24P1-201ENST00000438550 371 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AL031667.1-201ENST00000440222 725 ntBASIC3.77□□□□□ -1.81
LDLRP01130 NOTCH2P1-201ENST00000443481 624 ntBASIC3.77□□□□□ -1.81
LDLRP01130 BMI1P1-201ENST00000445879 941 ntBASIC3.77□□□□□ -1.81
LDLRP01130 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.77□□□□□ -1.81
LDLRP01130 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
LDLRP01130 RPS15AP17-201ENST00000470598 390 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AC092451.1-201ENST00000480211 153 ntBASIC3.77□□□□□ -1.81
LDLRP01130 ACTR3P3-201ENST00000480448 893 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AF213884.1-201ENST00000488102 463 ntBASIC3.77□□□□□ -1.81
LDLRP01130 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
LDLRP01130 AC093767.1-201ENST00000504523 156 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.77□□□□□ -1.81
LDLRP01130 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 IGKV2D-23-201ENST00000518179 286 ntBASIC3.77□□□□□ -1.81
LDLRP01130 IGKV2D-36-201ENST00000518643 226 ntBASIC3.77□□□□□ -1.81
LDLRP01130 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.77□□□□□ -1.81
LDLRP01130 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.77□□□□□ -1.81
LDLRP01130 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.77□□□□□ -1.81
LDLRP01130 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.77□□□□□ -1.81
LDLRP01130 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
LDLRP01130 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.77□□□□□ -1.81
LDLRP01130 ACTR3BP3-201ENST00000565577 979 ntBASIC3.77□□□□□ -1.81
LDLRP01130 ISCA1P3-201ENST00000577104 373 ntBASIC3.77□□□□□ -1.81
LDLRP01130 AC022655.2-201ENST00000577280 318 ntBASIC3.77□□□□□ -1.81
LDLRP01130 MIR3915-201ENST00000578518 97 ntBASIC3.77□□□□□ -1.81
LDLRP01130 MIR3200-201ENST00000580767 85 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms