Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 AC009313.2-201ENST00000417893 1941 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 RNU1-83P-201ENST00000363426 164 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RNU5E-8P-201ENST00000363502 116 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RNU6-26P-201ENST00000383985 107 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RNU6-444P-201ENST00000383988 108 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 Y_RNA.556-201ENST00000384677 113 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 SNORA66-201ENST00000384792 133 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 RPL31P52-201ENST00000407532 367 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RN7SKP158-201ENST00000410453 326 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 E2F6P2-201ENST00000420708 748 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RPL31P12-201ENST00000422587 358 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 DDX3P2-201ENST00000446138 111 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC107399.1-201ENST00000451226 265 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 AC106872.2-201ENST00000494303 480 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC091885.1-201ENST00000506658 268 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 FTH1P9-201ENST00000513251 355 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 Y_RNA.668-201ENST00000516233 93 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RNU6-864P-201ENST00000516256 108 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 RN7SKP260-201ENST00000516907 149 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 HMGB1P19-201ENST00000517578 577 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 AC123904.2-201ENST00000548059 300 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 NCAPGP2-201ENST00000557911 754 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 MIR3118-1-201ENST00000581787 76 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM13O60858 AC023813.4-201ENST00000607580 580 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 MTND5P19-201ENST00000424872 1794 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM13O60858 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM13O60858 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM13O60858 AC105074.1-201ENST00000623380 3095 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AC027228.2-201ENST00000567141 2154 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AL157777.2-201ENST00000258070 137 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM13O60858 Y_RNA.5-201ENST00000362334 102 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 U3.2-201ENST00000362981 210 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TRIM13O60858 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 Y_RNA.527-201ENST00000384573 102 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 RNU6-606P-201ENST00000384721 111 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 HMGB1P17-201ENST00000403495 628 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 RNU2-28P-201ENST00000410457 189 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AC008280.1-201ENST00000418851 412 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM13O60858 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC096644.2-201ENST00000429278 159 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC010881.1-201ENST00000433830 235 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC104058.1-201ENST00000448028 297 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 SLC25A18P1-201ENST00000449385 454 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM13O60858 Y_RNA.653-201ENST00000459091 95 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 GMFBP1-201ENST00000467831 427 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC083904.1-201ENST00000487828 231 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 Y_RNA.682-201ENST00000516457 100 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 RNU6-347P-201ENST00000516658 105 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 RN7SKP96-201ENST00000516948 297 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms