Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX3O60493 RNU6-433P-201ENST00000363216 104 ntBASIC3.43□□□□□ -1.86
SNX3O60493 SNORA7.2-201ENST00000364446 145 ntBASIC3.43□□□□□ -1.86
SNX3O60493 SNORD6-201ENST00000365444 73 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 RNU6-723P-201ENST00000383973 107 ntBASIC3.43□□□□□ -1.86
SNX3O60493 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 AC107081.1-201ENST00000414975 361 ntBASIC3.43□□□□□ -1.86
SNX3O60493 RPS7P15-201ENST00000415804 584 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX3O60493 MTND1P20-201ENST00000430341 950 ntBASIC3.43□□□□□ -1.86
SNX3O60493 SNRPEP7-201ENST00000438350 220 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AC009969.1-201ENST00000438726 172 ntBASIC3.43□□□□□ -1.86
SNX3O60493 HMGB3P11-201ENST00000440127 604 ntBASIC3.43□□□□□ -1.86
SNX3O60493 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX3O60493 MTCO1P27-201ENST00000448269 226 ntBASIC3.43□□□□□ -1.86
SNX3O60493 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX3O60493 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX3O60493 HMGB1P15-201ENST00000453854 435 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
SNX3O60493 HMGB1P36-201ENST00000487709 576 ntBASIC3.43□□□□□ -1.86
SNX3O60493 RPS3AP22-201ENST00000488297 769 ntBASIC3.43□□□□□ -1.86
SNX3O60493 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 FTH1P9-201ENST00000513251 355 ntBASIC3.43□□□□□ -1.86
SNX3O60493 MRPS33P3-201ENST00000513456 322 ntBASIC3.43□□□□□ -1.86
SNX3O60493 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 RNU6-352P-201ENST00000516908 107 ntBASIC3.43□□□□□ -1.86
SNX3O60493 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SNX3O60493 MED28P5-201ENST00000528254 438 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.43□□□□□ -1.86
SNX3O60493 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX3O60493 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX3O60493 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX3O60493 AP000811.1-201ENST00000603803 651 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AC004853.1-201ENST00000604902 698 ntBASIC3.43□□□□□ -1.86
SNX3O60493 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.43□□□□□ -1.86
SNX3O60493 RNU4-89P-201ENST00000607443 133 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AL360219.1-201ENST00000610230 366 ntBASIC3.43□□□□□ -1.86
SNX3O60493 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AL713922.2-201ENST00000619384 716 ntBASIC3.43□□□□□ -1.86
SNX3O60493 AL031667.3-201ENST00000620124 655 ntBASIC3.43□□□□□ -1.86
SNX3O60493 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 AC007671.2-201ENST00000637344 619 ntBASIC3.43□□□□□ -1.86
SNX3O60493 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
SNX3O60493 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX3O60493 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX3O60493 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
SNX3O60493 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX3O60493 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SNX3O60493 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX3O60493 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX3O60493 RNA5SP88-201ENST00000365560 109 ntBASIC3.42□□□□□ -1.86
SNX3O60493 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX3O60493 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AL356131.1-201ENST00000405826 414 ntBASIC3.42□□□□□ -1.86
SNX3O60493 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX3O60493 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 CETN4P-201ENST00000432407 469 ntBASIC3.42□□□□□ -1.86
SNX3O60493 RPL21P112-201ENST00000434403 463 ntBASIC3.42□□□□□ -1.86
SNX3O60493 UBE2D3P1-201ENST00000436669 444 ntBASIC3.42□□□□□ -1.86
SNX3O60493 ART2BP-201ENST00000453501 499 ntBASIC3.42□□□□□ -1.86
SNX3O60493 Z82190.1-201ENST00000454534 490 ntBASIC3.42□□□□□ -1.86
SNX3O60493 NDUFA12P1-201ENST00000455914 406 ntBASIC3.42□□□□□ -1.86
SNX3O60493 snoU13.24-201ENST00000458998 104 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC146507.2-201ENST00000460608 476 ntBASIC3.42□□□□□ -1.86
SNX3O60493 ST13P14-201ENST00000474095 734 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
SNX3O60493 RPL23AP55-201ENST00000498163 452 ntBASIC3.42□□□□□ -1.86
SNX3O60493 NDUFB4P9-201ENST00000511646 388 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC024589.1-201ENST00000512207 263 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC023141.12-201ENST00000512399 199 ntBASIC3.42□□□□□ -1.86
SNX3O60493 RNA5SP216-201ENST00000516111 123 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 AP004242.1-201ENST00000533701 349 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 AC008015.1-201ENST00000555505 465 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC090615.1-201ENST00000577519 154 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.42□□□□□ -1.86
SNX3O60493 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX3O60493 AC006254.3-201ENST00000603353 884 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AP000346.3-201ENST00000622821 210 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AP000676.3-201ENST00000623299 569 ntBASIC3.42□□□□□ -1.86
SNX3O60493 AC009039.2-201ENST00000624524 529 ntBASIC3.42□□□□□ -1.86
SNX3O60493 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX3O60493 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX3O60493 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms