Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 RPS15AP34-201ENST00000487776 387 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC080014.1-201ENST00000496877 1201 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC105914.1-201ENST00000511798 226 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 RN7SKP132-201ENST00000516001 208 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC008739.2-201ENST00000597006 317 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC007621.1-201ENST00000604544 437 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC103810.6-201ENST00000606708 136 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 AC006963.1-201ENST00000624003 1052 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.82□□□□□ -2.12
SSSCA1O60232 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SSSCA1O60232 MTCO1P6-201ENST00000481192 1384 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSSCA1O60232 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SSSCA1O60232 Z82209.1-201ENST00000422141 2135 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SSSCA1O60232 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SSSCA1O60232 SNORA51.11-201ENST00000384442 131 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 TAS2R15P-201ENST00000390674 928 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC096533.1-201ENST00000411645 353 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.81□□□□□ -2.12
SSSCA1O60232 MTCO1P39-201ENST00000426148 480 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC096632.1-201ENST00000427395 310 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.81□□□□□ -2.12
SSSCA1O60232 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.81□□□□□ -2.12
SSSCA1O60232 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.81□□□□□ -2.12
SSSCA1O60232 AC011753.1-201ENST00000451001 220 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.81□□□□□ -2.12
SSSCA1O60232 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.81□□□□□ -2.12
SSSCA1O60232 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.81□□□□□ -2.12
SSSCA1O60232 AC096992.1-201ENST00000459808 709 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC015908.1-201ENST00000478739 476 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.81□□□□□ -2.12
SSSCA1O60232 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.81□□□□□ -2.12
SSSCA1O60232 RNA5SP24-201ENST00000516478 95 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.81□□□□□ -2.12
SSSCA1O60232 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.81□□□□□ -2.12
SSSCA1O60232 LRRC37A5P-203ENST00000580181 585 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AC090616.3-201ENST00000582184 217 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 ELOCP29-201ENST00000588193 334 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 VN1R78P-201ENST00000597393 564 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 U73479.1-201ENST00000618062 168 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SSSCA1O60232 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SSSCA1O60232 AC007342.9-201ENST00000623877 1385 ntBASIC1.81□□□□□ -2.12
SSSCA1O60232 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SSSCA1O60232 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SSSCA1O60232 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
SSSCA1O60232 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 SET-203ENST00000372688 801 ntTSL 2 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.8□□□□□ -2.12
SSSCA1O60232 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.8□□□□□ -2.12
SSSCA1O60232 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 S100A11P2-201ENST00000467589 312 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.8□□□□□ -2.12
SSSCA1O60232 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AC234781.5-201ENST00000508429 271 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC025768.1-201ENST00000510057 267 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.8□□□□□ -2.12
SSSCA1O60232 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 MTCO1P47-201ENST00000523889 1271 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 MTCYBP20-201ENST00000524239 1129 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC113192.3-201ENST00000529152 742 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 SERPINE4P-201ENST00000554978 281 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.8□□□□□ -2.12
SSSCA1O60232 AC012182.1-201ENST00000570133 895 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AL035413.2-201ENST00000604801 525 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.8□□□□□ -2.12
SSSCA1O60232 BX323046.1-201ENST00000610145 535 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SSSCA1O60232 MIR6075-201ENST00000620782 95 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 AC008432.1-201ENST00000615912 1320 ntBASIC1.8□□□□□ -2.12
SSSCA1O60232 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.8□□□□□ -2.12
SSSCA1O60232 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SSSCA1O60232 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.8□□□□□ -2.12
SSSCA1O60232 ZNF658B-202ENST00000615961 3375 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SSSCA1O60232 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSSCA1O60232 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms