Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP2AO43633 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.1□□□□□ -1.91
CHMP2AO43633 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP2AO43633 AL592437.1-201ENST00000443781 492 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 MTND5P8-201ENST00000449817 1083 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AL445669.2-201ENST00000454425 421 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AC090136.1-201ENST00000520009 240 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 HIGD1AP6-201ENST00000521833 279 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHMP2AO43633 AC126177.3-201ENST00000551839 688 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 ATP5F1P7-201ENST00000567330 760 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 HMGB1P6-201ENST00000569046 646 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AP001330.4-201ENST00000604350 154 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AC245100.7-201ENST00000609678 442 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP2AO43633 AC010338.1-201ENST00000621823 717 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 AP006248.3-201ENST00000623580 594 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP2AO43633 FRG1DP-201ENST00000635586 771 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CHMP2AO43633 MAPK10-266ENST00000641066 6555 ntBASIC3.1□□□□□ -1.91
CHMP2AO43633 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP2AO43633 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHMP2AO43633 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP2AO43633 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP2AO43633 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP2AO43633 RNU6-796P-201ENST00000391086 107 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 NPM1P10-201ENST00000398310 865 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 TATDN1P1-201ENST00000414123 891 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC012498.1-201ENST00000424037 437 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC233728.2-201ENST00000425348 757 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AL035410.1-201ENST00000427409 427 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP2AO43633 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP2AO43633 AC104472.2-201ENST00000469035 601 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.09□□□□□ -1.91
CHMP2AO43633 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP2AO43633 AC105914.1-201ENST00000511798 226 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP2AO43633 AC007954.1-201ENST00000554198 494 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AL035413.2-201ENST00000604801 525 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 MIR1264-201ENST00000616374 69 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP2AO43633 AC097372.4-201ENST00000625025 466 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP2AO43633 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP2AO43633 MTND2P41-201ENST00000637599 773 ntBASIC3.09□□□□□ -1.91
CHMP2AO43633 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2AO43633 RNU2-52P-201ENST00000410680 190 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2AO43633 AL139281.1-201ENST00000422120 335 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 SNORD109B-201ENST00000458961 67 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 SNORD109A-201ENST00000459128 67 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 OR52A4P-202ENST00000481634 799 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC119751.5-201ENST00000514077 770 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC026616.1-201ENST00000523157 525 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC090666.1-201ENST00000578241 445 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP2AO43633 AC040174.2-201ENST00000602701 465 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 DPRXP5-201ENST00000604662 539 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC016542.1-201ENST00000608259 493 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 AC005046.1-201ENST00000608515 625 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP2AO43633 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP2AO43633 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
CHMP2AO43633 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP2AO43633 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP2AO43633 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP2AO43633 Y_RNA.111-201ENST00000363248 100 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 CD24P4-201ENST00000382840 243 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC073310.1-201ENST00000423226 1033 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2AO43633 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP2AO43633 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP2AO43633 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2AO43633 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2AO43633 AC005002.1-201ENST00000447458 540 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC108938.1-201ENST00000451204 136 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC104073.1-201ENST00000451988 151 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 BX248409.1-201ENST00000455497 255 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC004924.1-201ENST00000480160 781 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP2AO43633 ARL4AP2-201ENST00000507378 601 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC034159.1-201ENST00000513885 583 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 SNORA31.21-201ENST00000517180 77 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms