Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC093840.1-201ENST00000511599 336 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC108064.1-201ENST00000513791 460 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 IGKV2-38-201ENST00000517443 247 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 PAICSP4-201ENST00000517543 1253 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AP002963.1-201ENST00000530590 184 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 SETP7-201ENST00000552169 453 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC010546.1-201ENST00000569391 485 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC006270.2-201ENST00000578523 652 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 OR4K8P-201ENST00000578842 1048 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN3O00409 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN3O00409 XIAPP1-201ENST00000603162 600 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC073648.5-201ENST00000603502 305 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC092354.2-201ENST00000607786 514 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC006566.1-201ENST00000608943 513 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC008498.1-201ENST00000613012 531 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN3O00409 MIR3653-201ENST00000625572 110 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN3O00409 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FOXN3O00409 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
FOXN3O00409 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
FOXN3O00409 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN3O00409 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXN3O00409 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN3O00409 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 MIR1183-201ENST00000408856 89 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 RN7SKP56-201ENST00000410513 331 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 RPL21P32-201ENST00000419877 477 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AL358472.1-201ENST00000431295 329 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN3O00409 UBE2V1P13-201ENST00000436983 439 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 RPL23AP46-201ENST00000438548 490 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AL592447.1-201ENST00000447592 540 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN3O00409 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FOXN3O00409 AC010469.1-201ENST00000463864 576 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 RPL9P32-201ENST00000464118 620 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN3O00409 RN7SL481P-201ENST00000477764 299 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC078817.1-201ENST00000492623 435 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 OR51K1P-201ENST00000510214 950 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC009643.1-201ENST00000532030 391 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN3O00409 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN3O00409 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN3O00409 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN3O00409 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN3O00409 MTND1P15-201ENST00000579262 949 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC012417.1-201ENST00000582307 1039 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC005771.1-201ENST00000585581 349 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC011451.2-201ENST00000604303 598 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC138932.5-201ENST00000617759 563 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC112204.3-201ENST00000623822 332 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 AC079597.1-201ENST00000624306 508 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXN3O00409 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 MTND5P29-201ENST00000458676 1807 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 AC116667.1-201ENST00000604855 2072 ntBASIC4.41□□□□□ -1.7
FOXN3O00409 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN3O00409 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.7
FOXN3O00409 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN3O00409 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.4□□□□□ -1.7
FOXN3O00409 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN3O00409 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
FOXN3O00409 FRG1BP-201ENST00000278882 761 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 Y_RNA.46-201ENST00000362695 102 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 RNA5SP513-201ENST00000364648 118 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 U3.20-201ENST00000390909 217 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 FCF1P10-201ENST00000407590 479 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 OR4K11P-201ENST00000431829 904 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXN3O00409 AC092641.1-201ENST00000440229 772 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AL022238.1-201ENST00000442557 355 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN3O00409 AC098824.1-201ENST00000453565 980 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC234775.1-201ENST00000454247 670 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC104308.1-201ENST00000454621 333 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AP1S2P1-201ENST00000457344 379 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN3O00409 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXN3O00409 AC068305.1-201ENST00000497406 726 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 ARL2BPP4-201ENST00000506854 471 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 NDUFB4P2-201ENST00000509515 391 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC023141.12-201ENST00000512399 199 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 MYL12AP1-201ENST00000518490 515 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms