Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
DFFAO00273 AC008432.1-201ENST00000615912 1320 ntBASIC2.83□□□□□ -1.96
DFFAO00273 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
DFFAO00273 MTND4P21-201ENST00000453886 1357 ntBASIC2.83□□□□□ -1.96
DFFAO00273 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
DFFAO00273 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
DFFAO00273 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.82□□□□□ -1.96
DFFAO00273 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 MIR649-201ENST00000384843 97 ntBASIC2.82□□□□□ -1.96
DFFAO00273 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AL591034.1-201ENST00000407447 340 ntBASIC2.82□□□□□ -1.96
DFFAO00273 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.82□□□□□ -1.96
DFFAO00273 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.82□□□□□ -1.96
DFFAO00273 MTCO3P12-201ENST00000416718 547 ntBASIC2.82□□□□□ -1.96
DFFAO00273 YPEL5P1-201ENST00000419731 367 ntBASIC2.82□□□□□ -1.96
DFFAO00273 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
DFFAO00273 AC005002.1-201ENST00000447458 540 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC004022.1-201ENST00000447766 1066 ntBASIC2.82□□□□□ -1.96
DFFAO00273 RPL36AP33-201ENST00000450395 310 ntBASIC2.82□□□□□ -1.96
DFFAO00273 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.82□□□□□ -1.96
DFFAO00273 RPL21P47-201ENST00000483696 477 ntBASIC2.82□□□□□ -1.96
DFFAO00273 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.82□□□□□ -1.96
DFFAO00273 RNU6-711P-201ENST00000517255 106 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC124293.1-201ENST00000530034 493 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
DFFAO00273 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 AL133271.1-201ENST00000538229 291 ntBASIC2.82□□□□□ -1.96
DFFAO00273 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
DFFAO00273 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AC087481.2-201ENST00000565492 330 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.82□□□□□ -1.96
DFFAO00273 AC023824.3-201ENST00000569003 562 ntBASIC2.82□□□□□ -1.96
DFFAO00273 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AL355812.1-201ENST00000603215 216 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.82□□□□□ -1.96
DFFAO00273 AC128687.1-201ENST00000605304 619 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AL110115.1-201ENST00000614396 364 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC231759.1-201ENST00000616455 597 ntBASIC2.82□□□□□ -1.96
DFFAO00273 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.82□□□□□ -1.96
DFFAO00273 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.82□□□□□ -1.96
DFFAO00273 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.82□□□□□ -1.96
DFFAO00273 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.82□□□□□ -1.96
DFFAO00273 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
DFFAO00273 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DFFAO00273 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
DFFAO00273 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
DFFAO00273 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DFFAO00273 AC092435.3-201ENST00000565538 3654 ntBASIC2.81□□□□□ -1.96
DFFAO00273 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
DFFAO00273 RNU6-1249P-201ENST00000363237 111 ntBASIC2.81□□□□□ -1.96
DFFAO00273 RNVU1-3-201ENST00000364313 161 ntBASIC2.81□□□□□ -1.96
DFFAO00273 RNU1-112P-201ENST00000364401 164 ntBASIC2.81□□□□□ -1.96
DFFAO00273 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
DFFAO00273 RNU4-65P-201ENST00000410473 140 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC109780.2-201ENST00000413467 845 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 RABEPKP1-201ENST00000440529 1026 ntBASIC2.81□□□□□ -1.96
DFFAO00273 MTCO3P43-201ENST00000440974 771 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 HMGB1P25-201ENST00000468402 607 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.81□□□□□ -1.96
DFFAO00273 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.81□□□□□ -1.96
DFFAO00273 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DFFAO00273 ARL4AP2-201ENST00000507378 601 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC010468.3-201ENST00000508225 458 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC026801.2-201ENST00000515352 425 ntBASIC2.81□□□□□ -1.96
DFFAO00273 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.81□□□□□ -1.96
DFFAO00273 AC079600.2-201ENST00000550076 130 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.81□□□□□ -1.96
DFFAO00273 AC006504.3-201ENST00000586818 523 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.81□□□□□ -1.96
DFFAO00273 BDH2P1-201ENST00000602288 736 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AL020997.3-201ENST00000602843 359 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.81□□□□□ -1.96
DFFAO00273 AC012467.1-201ENST00000607740 256 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC245100.7-201ENST00000609678 442 ntBASIC2.81□□□□□ -1.96
DFFAO00273 VIS1.1-201ENST00000610517 203 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC018755.4-201ENST00000619715 454 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC092650.2-201ENST00000619984 902 ntBASIC2.81□□□□□ -1.96
DFFAO00273 AC098679.5-201ENST00000624394 571 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms