Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AP000547.3-204ENST00000588548 2523 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.133-201ENST00000363428 110 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RNU6-196P-201ENST00000384315 107 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RNU6-1105P-201ENST00000384774 107 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RNU6-308P-201ENST00000390957 107 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL356057.3-201ENST00000402607 340 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RNA5SP113-201ENST00000410486 84 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RN7SKP159-201ENST00000410657 292 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 VDAC1P9-201ENST00000412766 841 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL137792.2-201ENST00000443484 235 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 HMGB3P22-202ENST00000451823 572 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 BX276092.4-201ENST00000452056 248 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 ELOCP24-201ENST00000456370 334 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RPL21P8-201ENST00000465083 535 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RPS24P16-201ENST00000497294 392 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RPL23AP55-201ENST00000498163 452 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RPS27P27-201ENST00000498779 255 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC010350.1-201ENST00000504908 231 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC108078.2-201ENST00000510750 236 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 IGKV1-32-201ENST00000519290 311 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC093012.1-202ENST00000549403 582 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 OR11H5P-201ENST00000554039 926 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL355812.1-201ENST00000603215 216 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL391358.1-201ENST00000605342 190 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL008729.2-201ENST00000606393 473 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC006329.2-201ENST00000611491 394 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RMST_9.1-201ENST00000619945 193 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AC103710.2-202ENST00000641454 2853 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AL355834.1-201ENST00000556602 3965 ntBASIC6.16□□□□□ -1.42
USP17L3A6NCW0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.112-201ENST00000363250 102 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RNU6-1284P-201ENST00000363701 100 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 SNORA70.6-201ENST00000383934 134 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RNU6-637P-201ENST00000384050 107 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RNU6-339P-201ENST00000384310 107 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.482-201ENST00000384377 111 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC113618.1-201ENST00000416747 285 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AL358176.2-201ENST00000425769 204 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RPS26P47-201ENST00000427219 348 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 IGHV5-78-201ENST00000450948 295 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RPL30P15-201ENST00000457129 321 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RN7SL443P-201ENST00000464331 290 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RN7SL197P-201ENST00000466981 299 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RPL7P43-201ENST00000478876 753 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RNU6-189P-201ENST00000516120 101 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 DEFB108D-201ENST00000527787 222 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RANP3-201ENST00000530970 276 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC069061.3-201ENST00000582254 823 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC023043.2-201ENST00000589678 1026 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC104687.2-201ENST00000604442 342 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 AC010632.3-201ENST00000611377 369 ntBASIC6.15□□□□□ -1.42
USP17L3A6NCW0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP17L3A6NCW0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms