Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RNU6-356P-201ENST00000384140 107 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RNU6-342P-201ENST00000384521 104 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 GAPDHP27-201ENST00000447427 1020 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC090543.1-201ENST00000492168 485 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC119751.1-201ENST00000513357 765 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 VTA1P2-201ENST00000520205 911 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AL356266.1-201ENST00000623311 483 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC009452.1-201ENST00000640823 606 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC066616.2-201ENST00000559334 1481 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RNU6-178P-201ENST00000384631 104 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RPS7P9-201ENST00000414704 586 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RPS15AP6-201ENST00000420703 385 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 HMGB3P8-201ENST00000449709 577 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC091515.1-201ENST00000548110 679 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC122134.1-201ENST00000565664 1104 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AL451074.6-201ENST00000608512 729 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 AC067852.7-201ENST00000623270 535 ntBASIC2.06□□□□□ -2.08
CNOT1A5YKK6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 MTCO1P14-201ENST00000441695 1559 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 RPL23AP74-201ENST00000437246 471 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC009969.1-201ENST00000438726 172 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 VN1R80P-201ENST00000597126 338 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AL078603.1-201ENST00000603824 313 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 BX248123.2-201ENST00000606318 124 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AL359740.1-201ENST00000624340 592 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 RNU2-6P-201ENST00000411404 190 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AP1B1P2-201ENST00000416196 106 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 ATG3P1-201ENST00000419507 911 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 PTP4A1P1-201ENST00000420539 515 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC009238.1-201ENST00000442165 424 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC009237.6-201ENST00000446969 424 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AL118520.1-201ENST00000450770 291 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC068305.1-201ENST00000497406 726 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AMZ2P1-203ENST00000565833 850 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AL450489.1-201ENST00000612071 468 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 AC025048.6-202ENST00000627667 438 ntBASIC2.05□□□□□ -2.08
CNOT1A5YKK6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CNOT1A5YKK6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 GTF2H2B-203ENST00000508065 1432 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 SNORA51.4-201ENST00000364993 124 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 RNU2-68P-201ENST00000410878 191 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 AC007395.1-201ENST00000451333 677 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 AC140059.1-201ENST00000489238 361 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 MIR6895-201ENST00000613497 78 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 MIR6515-201ENST00000619843 57 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 AC009831.4-201ENST00000620744 325 ntBASIC2.04□□□□□ -2.08
CNOT1A5YKK6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CNOT1A5YKK6 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AL121594.1-201ENST00000475906 575 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC017007.3-201ENST00000479865 435 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC011604.1-201ENST00000545978 196 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 OR7K1P-201ENST00000546439 926 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 CBX3P5-201ENST00000552017 521 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC010546.1-201ENST00000569391 485 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 SNORA62.2-201ENST00000364672 152 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 RPS3AP9-201ENST00000417027 792 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AL591704.1-201ENST00000432574 275 ntBASIC2.03□□□□□ -2.08
CNOT1A5YKK6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.03□□□□□ -2.08
CNOT1A5YKK6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms