Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PABPC1P7-201ENST00000413177 1513 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 SNORA67.1-201ENST00000364749 141 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 DNAJC19P6-201ENST00000401853 280 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC073264.1-201ENST00000411508 416 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 MTCO3P30-201ENST00000426425 670 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AL590664.1-201ENST00000448065 339 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 CDC42P4-201ENST00000510507 563 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC022690.1-201ENST00000526681 550 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC245389.2-201ENST00000616023 576 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC243756.2-201ENST00000618406 463 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 AC242843.1-201ENST00000618702 573 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 RMST_5.1-201ENST00000618704 126 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 ZNF734P-201ENST00000419494 1534 ntBASIC2.01□□□□□ -2.09
TCRBV3S1A0A5B6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 ANKRD36P1-201ENST00000344424 659 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 LAMTOR3P1-201ENST00000428620 370 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 PSMA2P3-201ENST00000429685 675 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 MTCYBP29-201ENST00000436327 1006 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 RPS23P3-201ENST00000470993 430 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 MTND3P24-201ENST00000506306 329 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 HMGB3P3-201ENST00000510526 400 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AC087808.1-201ENST00000520501 361 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 CIR1P1-201ENST00000524055 1133 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AP003385.6-201ENST00000531603 374 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 GTF3AP2-201ENST00000557014 266 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 AC009314.1-201ENST00000603871 304 ntBASIC2□□□□□ -2.09
TCRBV3S1A0A5B6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 RNA5SP68-201ENST00000363885 119 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 RNU6-1181P-201ENST00000384191 106 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC107081.1-201ENST00000414975 361 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 MORF4L1P7-201ENST00000426038 703 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 HMGB1P15-201ENST00000453854 435 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC111000.5-201ENST00000506559 1178 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 RNA5SP148-201ENST00000516527 94 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 NOP56P3-201ENST00000549457 385 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC012182.1-201ENST00000570133 895 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 NUTF2P8-201ENST00000604593 363 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC106791.2-201ENST00000604680 391 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 OR2AS2P-201ENST00000606902 342 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 DUXAP9-208ENST00000622815 614 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 RPL23AP61-201ENST00000623642 466 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 AC135776.4-201ENST00000624300 1904 ntBASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.99□□□□□ -2.09
TCRBV3S1A0A5B6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 RNU2-21P-201ENST00000410368 188 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 RNA5SP38-201ENST00000410750 119 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL137014.1-201ENST00000420490 1226 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 ELOCP13-201ENST00000443934 329 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC010301.1-201ENST00000473936 355 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 GAPDHP39-201ENST00000481866 979 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 SCARNA16.3-201ENST00000516595 184 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms