Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC010975.3-201ENST00000618727 978 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AL121895.2-201ENST00000619558 447 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AL355578.1-201ENST00000607405 1328 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AF127577.6-201ENST00000623352 2191 ntBASIC3.15□□□□□ -1.9
SMIM28A0A1B0GU29 AP005901.5-201ENST00000545779 1796 ntBASIC3.15□□□□□ -1.9
SMIM28A0A1B0GU29 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.9
SMIM28A0A1B0GU29 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.15□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-251P-201ENST00000363235 104 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RNU4-51P-201ENST00000364206 140 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-224P-201ENST00000384055 107 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AL121978.1-201ENST00000402778 359 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 LUZP4P1-201ENST00000415420 344 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 MTND2P16-201ENST00000419987 799 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC096632.1-201ENST00000427395 310 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 MTCO1P3-201ENST00000429327 192 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RPL21P112-201ENST00000434403 463 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC093155.1-201ENST00000440164 826 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 NPM1P49-201ENST00000448027 714 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AL162389.1-201ENST00000449233 177 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RPL23AP62-201ENST00000463396 453 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 RNF138P1-201ENST00000502765 546 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 HIGD1AP13-201ENST00000509878 289 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 MTCO3P44-201ENST00000510977 541 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC009101.1-201ENST00000568135 242 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC025588.3-201ENST00000604182 274 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 PART1_2.1-201ENST00000612397 250 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AL157770.1-201ENST00000623049 439 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 SCARNA15.3-201ENST00000626315 122 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 SCARNA4.1-201ENST00000628597 123 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 AC096644.4-201ENST00000563417 2912 ntBASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMIM28A0A1B0GU29 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC004972.1-201ENST00000623934 2209 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 OR5J1P-201ENST00000313544 939 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 MIR607-201ENST00000385241 96 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA40.2-201ENST00000390847 128 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 MIR1250-201ENST00000408098 113 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 MTCYBP24-201ENST00000420387 1106 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 HMGN3P1-201ENST00000453847 193 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 RPL31P13-201ENST00000484151 370 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC084024.2-201ENST00000503480 791 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC119751.5-201ENST00000514077 770 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC026801.2-201ENST00000515352 425 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AP001317.1-201ENST00000531194 960 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC093519.1-201ENST00000566109 298 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 VN1R83P-201ENST00000595685 445 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC110741.2-201ENST00000605278 268 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC144521.1-201ENST00000607148 956 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL391262.2-201ENST00000622466 494 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AC109454.4-201ENST00000623411 649 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 SEPT7P7-201ENST00000420492 1301 ntBASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SMIM28A0A1B0GU29 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms