Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 SNRPGP18-201ENST00000553000 214 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC026464.5-201ENST00000562497 722 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC090312.2-201ENST00000582687 378 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC023043.3-201ENST00000593113 385 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AL158827.2-201ENST00000602494 330 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC104763.2-201ENST00000604179 382 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC067747.1-201ENST00000608026 250 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC055764.2-201ENST00000610089 670 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC069528.2-201ENST00000624849 1991 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 RNU6-600P-201ENST00000362524 99 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 RNU6-253P-201ENST00000384730 105 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AL096701.2-201ENST00000416920 238 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 TOMM20P4-201ENST00000427861 435 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC023347.2-201ENST00000433994 462 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 MUPP-201ENST00000438111 566 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 XKRYP6-201ENST00000440468 1116 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 XKRYP3-201ENST00000442113 1116 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 MTND2P8-201ENST00000450555 1025 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 XKRY-201ENST00000510392 1100 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC026412.2-201ENST00000512270 1075 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 SNORD59.2-201ENST00000516873 68 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 AC006378.2-201ENST00000623178 2476 ntBASIC2.13□□□□□ -2.07
TRAV17A0A0B4J275 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RPL21P132-201ENST00000331267 462 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RNU1-109P-201ENST00000383960 147 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 MIR142-201ENST00000384835 87 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RNA5SP492-201ENST00000411330 114 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RAD23BP2-201ENST00000416003 1207 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 RPL23AP33-201ENST00000442301 452 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 TPMTP4-201ENST00000450749 678 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 NCOR1P1-202ENST00000486162 291 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 MTND5P4-201ENST00000514978 288 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 OR6C73P-201ENST00000546432 358 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 CENPUP2-201ENST00000555897 1186 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC090616.5-202ENST00000582111 297 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC061975.8-201ENST00000587058 721 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 SNRPGP15-201ENST00000600149 222 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC091057.2-201ENST00000602594 792 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 HMGN2P28-201ENST00000606102 262 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.12□□□□□ -2.07
TRAV17A0A0B4J275 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 AC073055.1-201ENST00000456901 1621 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 RNA5SP432-201ENST00000362480 116 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 Y_RNA.62-201ENST00000362840 99 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 SNORA51.2-201ENST00000364595 132 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 HMGN2P35-201ENST00000412164 270 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 OR51A3P-201ENST00000413596 924 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 BX276092.3-201ENST00000424182 230 ntBASIC2.11□□□□□ -2.07
TRAV17A0A0B4J275 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms