Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 EI24P4-201ENST00000423683 1078 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 GAPDHP58-201ENST00000438477 1006 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 OR2AO1P-201ENST00000476497 403 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AL035690.1-201ENST00000490892 383 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC097462.2-201ENST00000504623 481 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC087369.1-201ENST00000520775 996 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC005951.2-201ENST00000576282 495 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AC012119.1-201ENST00000603184 222 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 AL137003.2-201ENST00000606924 2538 ntBASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CCDC61Q9Y6R9 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 RNU4-44P-201ENST00000363050 141 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.215-201ENST00000364204 112 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 SMIM11P1-201ENST00000369586 178 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 RN7SKP159-201ENST00000410657 292 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC116036.1-201ENST00000412199 367 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC006946.1-201ENST00000429106 328 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC008264.1-201ENST00000447612 367 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 PPIAP3-201ENST00000450588 505 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC004129.2-201ENST00000457229 287 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 RN7SL30P-201ENST00000488416 306 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-1333P-201ENST00000516162 93 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC044860.2-201ENST00000561005 179 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 MRPS21P7-201ENST00000566937 238 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 AL161637.1-201ENST00000622380 412 ntBASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CCDC61Q9Y6R9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.9□□□□□ -1.15
CCDC61Q9Y6R9 AC097063.1-201ENST00000426714 1797 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AC130650.2-201ENST00000618736 2403 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-102P-201ENST00000384485 104 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 PRUNEP1-201ENST00000425846 705 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 HSPD1P21-201ENST00000436541 245 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 Y_RNA.638-201ENST00000459374 113 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AC090151.1-201ENST00000520784 730 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 AC115085.1-201ENST00000588924 229 ntBASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC61Q9Y6R9 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 HSPA8P4-201ENST00000511877 1920 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RNA5SP319-201ENST00000362768 119 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-45P-201ENST00000384471 107 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-257P-201ENST00000410238 98 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms