Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AL512310.1-201ENST00000548639 172 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC126177.3-201ENST00000551839 688 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL133153.1-201ENST00000557756 303 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 MIR4715-201ENST00000584117 79 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AP001429.1-201ENST00000602568 530 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC012669.1-201ENST00000603209 283 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL121932.1-201ENST00000605542 214 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AF250324.2-201ENST00000608299 610 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL391813.2-201ENST00000609113 322 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC091905.1-201ENST00000624400 311 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC019226.1-201ENST00000625666 515 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC004925.1-201ENST00000624256 2706 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 AC105074.1-201ENST00000623380 3095 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 OR51H2P-202ENST00000641424 3046 ntBASIC4.53□□□□□ -1.68
PCDHGA6Q9Y5G7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
PCDHGA6Q9Y5G7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 ELF2P3-201ENST00000445099 1506 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL359922.3-201ENST00000624779 1670 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 OR1S2-201ENST00000302592 978 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 RNU6-108P-201ENST00000365558 107 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC068538.1-201ENST00000376856 336 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 SNORD96B-201ENST00000386148 79 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 RNA5SP397-201ENST00000391323 118 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL590002.1-201ENST00000406554 418 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 BTF3P7-201ENST00000407097 488 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 EI24P1-201ENST00000416584 867 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC092832.1-201ENST00000422934 400 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 RPL23AP1-201ENST00000428990 471 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 OR4K11P-201ENST00000431829 904 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC092162.1-201ENST00000432828 434 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC140076.1-201ENST00000449897 361 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL672167.3-201ENST00000465951 960 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 DEFB109F-201ENST00000491870 277 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC135721.1-201ENST00000497954 479 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC010342.1-201ENST00000514047 877 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 RPL21P12-201ENST00000559810 515 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC007363.1-201ENST00000604736 620 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AC017083.3-201ENST00000609955 700 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 LRRC77P-213ENST00000637727 880 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 ZFRP1-201ENST00000457579 2970 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA6Q9Y5G7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 Y_RNA.573-201ENST00000384763 105 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 ELOCP19-201ENST00000411919 318 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 MRPS10P2-201ENST00000431226 381 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 GPR143P-201ENST00000434155 205 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 TDGF1P1-201ENST00000445734 527 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 RPL23AP20-201ENST00000447965 421 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AL162591.2-201ENST00000449634 317 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AC003071.1-201ENST00000451219 789 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 RPS3AP50-201ENST00000487064 803 ntBASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA6Q9Y5G7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms