Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP001893.2-201ENST00000526949 202 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC092325.1-201ENST00000566449 554 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 MTCO3P24-201ENST00000572729 782 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 MIR3138-201ENST00000585238 82 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC112230.1-201ENST00000604342 547 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 ARF4P1-201ENST00000605447 541 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC011816.2-201ENST00000607089 556 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AL355472.4-201ENST00000610233 626 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AL590282.1-201ENST00000610379 1136 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AL590099.1-201ENST00000615276 138 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC002550.2-201ENST00000621246 394 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 CR381572.1-201ENST00000625098 102 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 BMS1P21-201ENST00000634565 365 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC025031.4-201ENST00000621248 3271 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 AC000123.3-201ENST00000624029 4975 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 MFSD8-242ENST00000641690 4199 ntBASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHB1Q9Y5F3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 RNA5SP28-201ENST00000363841 119 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.372-201ENST00000365599 102 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.390-201ENST00000383932 102 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 SNORA48.7-201ENST00000391302 135 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 CCNG1P1-201ENST00000406783 885 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 RNU4-55P-201ENST00000410731 137 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 HMGN1P24-201ENST00000412282 298 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MTND3P17-201ENST00000416968 344 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC233728.2-201ENST00000425348 757 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC073464.1-201ENST00000429823 534 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC119618.1-201ENST00000434191 222 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL451074.3-201ENST00000437709 472 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MTCO3P38-201ENST00000468910 766 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC007182.2-201ENST00000489251 402 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 SNORA59B-202ENST00000578183 701 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL669831.4-202ENST00000590817 238 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC010680.4-201ENST00000605334 543 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 MIR98-201ENST00000606724 119 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC012150.2-201ENST00000621300 544 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL359880.1-201ENST00000621879 266 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC009268.2-201ENST00000621925 457 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC091905.2-201ENST00000623143 306 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AC091953.2-201ENST00000623979 160 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 AL157786.1-207ENST00000627771 695 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 OR14L1P-202ENST00000641545 3009 ntBASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB1Q9Y5F3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LINC00622-201ENST00000562811 1570 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC004520.1-201ENST00000608362 1413 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC021146.4-201ENST00000309229 279 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RNY1P12-201ENST00000364251 105 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-356P-201ENST00000384140 107 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 MIR195-201ENST00000385194 87 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL590002.1-201ENST00000406554 418 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC137499.1-201ENST00000427602 88 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RPL31P35-201ENST00000431058 377 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC104850.1-201ENST00000435940 476 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms