Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 USP9YP25-201ENST00000457708 443 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 RPS15AP17-201ENST00000470598 390 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 ACTG1P13-201ENST00000486987 1043 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC114981.1-201ENST00000503897 678 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 HMGB1P28-201ENST00000507778 552 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC026412.2-201ENST00000512270 1075 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 DUXAP2-201ENST00000519198 589 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 SLC2A13P1-201ENST00000531560 322 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 DUXAP3-201ENST00000603616 594 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC092354.2-201ENST00000607786 514 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AL451074.6-201ENST00000608512 729 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC131235.4-201ENST00000609288 620 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC008121.2-201ENST00000614647 523 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AC091046.2-201ENST00000620775 665 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 AP001002.2-201ENST00000625137 386 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4BQ9Y4P1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RNA5SP295-201ENST00000362655 121 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 PTMAP5-201ENST00000393073 333 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 HMGB1P17-201ENST00000403495 628 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AP000567.1-201ENST00000406413 156 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RNU4-65P-201ENST00000410473 140 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RNU2-15P-201ENST00000410692 191 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC068533.2-201ENST00000411872 306 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AL158071.1-201ENST00000430315 461 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 ATP5JP1-201ENST00000431631 322 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 ATP5F1P1-201ENST00000433775 569 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC073063.1-201ENST00000434352 607 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AL662791.1-201ENST00000441992 928 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC096751.1-202ENST00000502691 1067 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC110760.3-202ENST00000515177 371 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-311P-201ENST00000516224 102 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 RN7SKP289-201ENST00000517244 295 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC104986.1-201ENST00000517978 436 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 OR4P1P-201ENST00000530808 1136 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 OR5B10P-201ENST00000532869 642 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 SETP7-201ENST00000552169 453 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 CCDC58P3-201ENST00000590792 430 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC024220.1-201ENST00000603675 484 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC015967.1-201ENST00000619893 476 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AL590240.3-201ENST00000621416 943 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 AC116618.1-201ENST00000634617 774 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 MIR1322-201ENST00000638013 71 ntBASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ATG4BQ9Y4P1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AL645937.1-201ENST00000641739 1652 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-50P-201ENST00000362356 103 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4BQ9Y4P1 AC245052.5-201ENST00000416320 649 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms