Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TRIM35Q9UPQ4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AC010332.2-201ENST00000613083 1904 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AL159987.1-201ENST00000347911 293 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.82-201ENST00000363000 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.92-201ENST00000363043 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.235-201ENST00000364412 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.306-201ENST00000365015 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.312-201ENST00000365089 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.322-201ENST00000365151 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 RNU6-1056P-201ENST00000383996 107 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 RNU6-937P-201ENST00000384325 106 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 MIR186-201ENST00000384988 86 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 MIR569-201ENST00000385228 96 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AL139039.1-201ENST00000401900 692 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AL357075.1-201ENST00000404107 726 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 TOMM20P4-201ENST00000427861 435 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 RPL12P11-201ENST00000439970 501 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AL445433.1-201ENST00000457507 257 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.650-201ENST00000459002 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 RPS27AP1-201ENST00000475545 471 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.686-201ENST00000516548 134 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 RNU6-971P-201ENST00000516920 106 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.777-201ENST00000516982 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AC006115.2-201ENST00000596823 202 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.771-201ENST00000598668 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AC084757.4-201ENST00000616350 526 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.789-201ENST00000622480 102 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 AP001784.1-201ENST00000624107 428 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 IGHVIII-44-202ENST00000636235 289 ntBASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM35Q9UPQ4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 SNORD1C-201ENST00000363315 78 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 Y_RNA.309-201ENST00000365046 111 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 GNG5P2-201ENST00000372054 207 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL079342.1-201ENST00000401460 267 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 DPPA2P2-201ENST00000418220 897 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL590399.2-201ENST00000427536 309 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC006946.1-201ENST00000429106 328 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL137159.1-201ENST00000452808 512 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 RNY3P16-201ENST00000516338 101 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC069113.1-201ENST00000517763 267 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AP000432.2-201ENST00000624164 2048 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 AL662795.2-201ENST00000624252 3706 ntBASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM35Q9UPQ4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 AL592148.3-201ENST00000608771 2646 ntBASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM35Q9UPQ4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms