Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 BNIP3P11-201ENST00000603878 563 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AL645568.2-201ENST00000432815 1337 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 GNG5P1-201ENST00000255500 204 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RNU6-839P-201ENST00000363347 108 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 SNORD82-201ENST00000365530 70 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 GTF2IP23-201ENST00000423746 351 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RPS20P24-201ENST00000457473 361 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RPL7P5-201ENST00000471472 736 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC010301.1-201ENST00000473936 355 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RPS17P11-201ENST00000474297 293 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC011825.1-201ENST00000484967 388 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 OR2A20P-203ENST00000498397 1268 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC009812.2-201ENST00000517657 457 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 AL512506.2-201ENST00000624472 458 ntBASIC3.24□□□□□ -1.89
CDH9Q9ULB4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH9Q9ULB4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 RNU6-712P-201ENST00000410558 100 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 RPL35AP12-201ENST00000425362 338 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC091390.3-201ENST00000426478 338 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 DPPA2P1-201ENST00000428060 556 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 GAPDHP39-201ENST00000481866 979 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC084024.2-201ENST00000503480 791 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC114967.1-201ENST00000504890 259 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 RNU1-61P-201ENST00000516107 151 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 ZNF971P-201ENST00000562068 1249 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 MIR4666A-201ENST00000580160 79 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC092474.3-201ENST00000603022 568 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC018755.4-201ENST00000619715 454 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 AC040168.1-201ENST00000623594 991 ntBASIC3.23□□□□□ -1.89
CDH9Q9ULB4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH9Q9ULB4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 OR5H2-201ENST00000355273 945 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 RNU5B-1-201ENST00000363286 116 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL024474.1-201ENST00000404655 591 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC092638.1-201ENST00000411966 1275 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 RPL7P44-201ENST00000424827 742 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC241584.1-201ENST00000438469 1241 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms