Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC023813.2-201ENST00000564321 469 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC005951.1-201ENST00000576706 485 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 SNRPGP15-201ENST00000600149 222 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AP003973.1-201ENST00000604639 691 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL450336.1-201ENST00000605180 586 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC124312.4-201ENST00000605533 310 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL138478.1-201ENST00000612252 832 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC105227.2-201ENST00000615075 605 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 LINC02211-204ENST00000642024 1070 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AP005901.5-201ENST00000545779 1796 ntBASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBEC3BQ9UH17 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 HMGB1P5-201ENST00000255320 642 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 SNORD65.1-201ENST00000390889 71 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL133264.1-201ENST00000407157 562 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL136133.1-201ENST00000413694 376 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 SSR1P2-201ENST00000415208 787 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 NUP35P2-201ENST00000416748 943 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 Z93242.1-201ENST00000427102 353 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 VDAC1P3-201ENST00000434069 851 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC093155.1-201ENST00000440164 826 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 EEF1A1P39-201ENST00000440791 250 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL589880.1-201ENST00000448271 287 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 SSXP4-201ENST00000451349 245 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC005410.1-202ENST00000460347 485 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC010468.1-201ENST00000461022 817 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RPL21P8-201ENST00000465083 535 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC108729.1-201ENST00000487812 947 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RNA5SP135-201ENST00000517019 125 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 MTND2P26-201ENST00000528255 1029 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 MIR4504-201ENST00000577413 92 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 MIR4425-201ENST00000580572 84 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AL451074.6-201ENST00000608512 729 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC135507.2-201ENST00000612443 309 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC006386.1-201ENST00000619436 415 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBEC3BQ9UH17 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 MIR422A-201ENST00000362286 90 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 RNU4-68P-201ENST00000364314 141 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AL136310.1-201ENST00000404926 654 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AL592310.1-201ENST00000414330 671 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AL356320.2-201ENST00000417263 507 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 Z75741.2-201ENST00000417272 1167 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 RPS15AP6-201ENST00000420703 385 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 MTND2P5-201ENST00000432656 1006 ntBASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.18□□□□□ -1.9
APOBEC3BQ9UH17 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms