Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 UBE2NP1-201ENST00000545592 458 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 CR383656.7-201ENST00000548164 174 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC138915.2-201ENST00000569776 97 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC006557.5-201ENST00000603126 811 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC004987.4-201ENST00000603383 338 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC008962.1-201ENST00000605729 304 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC120349.2-201ENST00000625002 298 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AL136520.1-201ENST00000600311 1322 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA9Q9UGM1 AP005901.5-201ENST00000545779 1796 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL356473.1-201ENST00000406203 1408 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RNU6-882P-201ENST00000391025 103 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RNA5SP31-201ENST00000411144 127 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC069282.1-201ENST00000411911 526 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL592310.1-201ENST00000414330 671 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC091286.1-201ENST00000431233 461 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AP001992.1-205ENST00000462248 379 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC091564.1-201ENST00000464563 479 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 RPS15AP17-201ENST00000470598 390 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC098799.1-201ENST00000504752 800 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC069306.1-201ENST00000507006 843 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC104986.1-201ENST00000517978 436 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC103783.1-201ENST00000520506 373 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 HIGD1AP17-201ENST00000554576 276 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC069304.2-201ENST00000605154 435 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC024060.1-201ENST00000607052 494 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 U3.45-201ENST00000607547 219 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL451074.6-201ENST00000608512 729 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AL450489.1-201ENST00000612071 468 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC024257.5-201ENST00000612739 531 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC023158.2-201ENST00000614876 543 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC011330.2-201ENST00000621680 635 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA9Q9UGM1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 SNRPEP3-201ENST00000338402 276 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 Y_RNA.578-201ENST00000390903 88 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 U3.42-201ENST00000408746 214 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 MTATP6P19-201ENST00000413797 659 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms