Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HMGB3P6-201ENST00000444896 598 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AL671855.1-201ENST00000446875 1203 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 Z99127.3-201ENST00000448158 395 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC006539.3-201ENST00000454258 129 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 FCF1P6-201ENST00000456841 595 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AP001992.1-205ENST00000462248 379 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SNORA19.3-201ENST00000516165 130 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC008127.2-201ENST00000549925 1075 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 MIR3912-201ENST00000577566 105 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC103881.1-201ENST00000603476 538 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AL035411.2-201ENST00000604022 421 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC091946.2-201ENST00000606105 291 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC009237.15-201ENST00000610252 501 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC123767.1-202ENST00000620407 817 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 MTND2P41-201ENST00000637599 773 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 GDI2P1-201ENST00000429312 1336 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 GABPAP-201ENST00000419271 1356 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AP001350.1-201ENST00000601906 1524 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 MIR30E-201ENST00000362104 92 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 RNU5E-10P-201ENST00000363506 118 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 RNU4-51P-201ENST00000364206 140 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 SNORA7.4-201ENST00000384249 137 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 SNORA48.2-201ENST00000390926 124 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 RNU6-821P-201ENST00000390995 107 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 SNORA48.5-201ENST00000391143 135 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC096664.2-201ENST00000411843 406 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC007899.1-201ENST00000412776 775 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 CST9LP2-201ENST00000437612 320 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 USP9YP22-201ENST00000438971 294 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 RPS20P24-201ENST00000457473 361 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 RPL27AP5-201ENST00000469428 449 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL390838.2-201ENST00000602394 274 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC069545.1-201ENST00000605671 358 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC231759.1-201ENST00000616455 597 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AC099654.8-201ENST00000637757 681 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL645568.2-201ENST00000432815 1337 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AL353743.1-202ENST00000431724 1695 ntBASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCF1Q9UBD9 AP005901.5-201ENST00000545779 1796 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RNU6-600P-201ENST00000362524 99 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RNA5SP258-201ENST00000362750 119 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 HSPE1P26-201ENST00000405341 275 ntBASIC2.84□□□□□ -1.95
CLCF1Q9UBD9 RPL23AP47-201ENST00000408017 460 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms