Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC022031.1-201ENST00000585985 2593 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 XKRYP4-201ENST00000414395 483 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 XKRYP5-201ENST00000449659 483 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC098799.2-201ENST00000509466 868 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 RNU6-491P-201ENST00000516099 110 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 POLR2KP1-201ENST00000553226 168 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC007938.3-201ENST00000604965 623 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC090425.2-201ENST00000608818 501 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 BX664608.1-201ENST00000610519 487 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC091046.2-201ENST00000620775 665 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC006065.5-201ENST00000623427 349 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AL157700.1-201ENST00000561973 1432 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 SNORA36C-201ENST00000384289 132 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 RNU1-101P-201ENST00000391171 127 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AL035407.1-201ENST00000429211 571 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 ARL5AP3-201ENST00000439327 386 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 RPL37P6-202ENST00000464216 403 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AC104472.2-201ENST00000469035 601 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 IGKV2-36-201ENST00000519999 223 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 ZNF92P3-201ENST00000596594 954 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AL359198.2-201ENST00000611836 194 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 U6.48-201ENST00000618523 106 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 AL391597.1-201ENST00000618707 694 ntBASIC2.31□□□□□ -2.04
CCDC88CQ9P219 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC88CQ9P219 RNA5SP344-201ENST00000411081 104 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC234782.4-201ENST00000417646 1048 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 RN7SKP277-201ENST00000516895 283 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC012182.1-201ENST00000570133 895 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 RPL12P50-201ENST00000603116 116 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC107905.1-201ENST00000616204 426 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC119674.1-220ENST00000641502 1048 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC007256.1-201ENST00000392253 2765 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 RNA5SP432-201ENST00000362480 116 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 RNU6-56P-201ENST00000516986 93 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 EIF5A2P1-201ENST00000564027 460 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 MIR4474-201ENST00000579189 78 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 MIR3945-201ENST00000581853 98 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC010620.2-201ENST00000600135 313 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 SNRPGP15-201ENST00000600149 222 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC079228.1-201ENST00000624774 1049 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 CYP3A51P-201ENST00000633513 256 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 NSRP1P1-201ENST00000444067 1693 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
CCDC88CQ9P219 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC88CQ9P219 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 UBE2V1P5-201ENST00000440070 405 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 HMGN1P5-201ENST00000448591 263 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 snoU13.15-201ENST00000459407 104 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 VN1R17P-201ENST00000472048 1090 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC104687.1-201ENST00000485829 412 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC112673.1-201ENST00000513168 575 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC104986.1-201ENST00000517978 436 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms