Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC090071.1-201ENST00000507713 644 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP5-201ENST00000511770 630 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO2P32-201ENST00000514865 403 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC087276.1-201ENST00000529659 480 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 OR6C7P-201ENST00000547875 934 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 SULT1C2P1-202ENST00000562418 459 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RNVU1-4-201ENST00000612985 164 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL357559.1-201ENST00000622228 274 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AP001486.2-201ENST00000561652 5113 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RN7SKP227-201ENST00000364445 330 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 Y_RNA.359-201ENST00000365498 102 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AP002088.1-201ENST00000382740 395 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-723P-201ENST00000383973 107 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 U1.1-201ENST00000384101 164 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ZYG11AP1-201ENST00000430329 837 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP7-201ENST00000436723 430 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 COX6CP12-201ENST00000446748 202 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RPL39P6-201ENST00000448289 150 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP32-201ENST00000452432 430 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 NUTF2P7-201ENST00000453086 375 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 UBDP1-202ENST00000457888 382 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC103987.1-201ENST00000473394 348 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC116337.2-201ENST00000477662 156 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 HMGB1P21-201ENST00000502313 581 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC006499.2-201ENST00000513470 337 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-150P-201ENST00000516237 95 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AP000873.5-201ENST00000533906 236 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 LARP7P2-201ENST00000575306 125 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC004987.4-201ENST00000603383 338 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 RMST_8.1-201ENST00000610287 165 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 AL359535.1-201ENST00000612100 1087 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 MIR6875-201ENST00000617506 72 ntBASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMARCAL1Q9NZC9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 MIR649-201ENST00000384843 97 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL121972.1-201ENST00000402023 252 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC092017.2-201ENST00000427600 362 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 UBE2FP3-201ENST00000436366 524 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 MTND1P34-201ENST00000438556 671 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP29-201ENST00000445112 563 ntBASIC3.85□□□□□ -1.79
SMARCAL1Q9NZC9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms